contig_metadata
27 rows where bioproject = "PRJNA672101" and tax_phylum = "Bacillota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1918020 | 1918020 | PRJNA672101_S_NODE_19342_length_288_cov_4.646512_g19311_i0 | PRJNA672101 | 19342 | 288 | 4.646512 | 13.38195456 | Streptococcus mitis | 28037 | Bacteria | Bacteria | 505 | 1.7e-138 | NTclustered | gi|927035354|gb|CP012646.1| | 28037 | g19311 | i0 | 98.264 | 100.260416666667 | 288 | 5 | 100 | 0 | 1 | 288 | 848924 | 849211 | Streptococcus mitis strain KCOM 1350 (= ChDC B183), complete genome | blastn | 28875 | 505 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 4993748 | 4993748 | PRJNA672101_S_NODE_12004_length_332_cov_2.972973_g11973_i0 | PRJNA672101 | 12004 | 332 | 2.972973 | 9.87027036 | Streptococcus | 1301 | Bacteria | Bacteria | 569 | 6.979999999999998e-158 | NTclustered | gi|2886510793|emb|OZ217345.1| | 28037 | g11973 | i0 | 100 | 92.7710843373494 | 308 | 0 | 93 | 0 | 25 | 332 | 1940091 | 1939784 | Streptococcus mitis isolate S. mitis F22 genome assembly, chromosome: 1 | blastn | 30800 | 569 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus mitis | ||
| 4993754 | 4993754 | PRJNA672101_S_NODE_17324_length_298_cov_3.053333_g17293_i0 | PRJNA672101 | 17324 | 298 | 3.053333 | 9.09893234 | Bacillati | 1783272 | Bacteria | Bacteria | 551 | 2.239999999999999e-152 | NTclustered | gi|1176884116|gb|CP020463.1| | 1282 | g17293 | i0 | 100 | 510.761744966443 | 298 | 0 | 100 | 0 | 1 | 298 | 748995 | 748698 | Staphylococcus epidermidis strain 1457 chromosome, complete genome | blastn | 152207 | 551 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 7020382 | 7020382 | PRJNA672101_S_NODE_14206_length_317_cov_1.893443_g14175_i0 | PRJNA672101 | 14206 | 317 | 1.893443 | 6.00221431 | Clostridium sp. HCS.1 | 3238594 | Bacteria | Bacteria | 176 | 1.69e-39 | NTclustered | gi|2915616244|gb|CP170704.1| | 3238594 | g14175 | i0 | 85.976 | 19.2429022082019 | 164 | 23 | 52 | 0 | 108 | 271 | 3294369 | 3294532 | Clostridium sp. HCS.1 chromosome, complete genome | blastn | 6100 | 176 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium sp. HCS.1 | ||
| 7543363 | 7543363 | PRJNA672101_S_NODE_18286_length_293_cov_3.500000_g18255_i0 | PRJNA672101 | 18286 | 293 | 3.5 | 10.255 | Bacillus | 1386 | Bacteria | Bacteria | 52.8 | 0.027 | NTclustered | gi|1368337268|gb|CP026678.1| | 1396 | g18255 | i0 | 100 | 6.02047781569966 | 28 | 0 | 10 | 0 | 75 | 102 | 1747367 | 1747394 | Bacillus cereus strain TG1-6 chromosome, complete genome | blastn | 1764 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus cereus | ||
| 7543376 | 7543376 | PRJNA672101_S_NODE_25666_length_261_cov_6.484043_g25635_i0 | PRJNA672101 | 25666 | 261 | 6.484043 | 16.92335223 | Clostridia | 186801 | Bacteria | Bacteria | 202 | 2.2299999999999996e-47 | NTclustered | gi|1243915026|emb|LT907978.1| | 39488 | g25635 | i0 | 81.467 | 283.302681992337 | 259 | 36 | 97 | 11 | 8 | 261 | 276294 | 276043 | [Eubacterium] hallii isolate EH1 genome assembly, chromosome: I | blastn | 73942 | 202 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Anaerobutyricum | Anaerobutyricum hallii | ||
| 8295192 | 8295192 | PRJNA672101_S_NODE_22887_length_272_cov_4.256281_g22856_i0 | PRJNA672101 | 22887 | 272 | 4.256281 | 11.57708432 | Staphylococcus epidermidis | 1282 | Bacteria | Bacteria | 496 | 9.59e-136 | NTclustered | gi|1518959137|gb|CP033782.1| | 1282 | g22856 | i0 | 99.631 | 99.6323529411765 | 271 | 1 | 99 | 0 | 2 | 272 | 1994494 | 1994224 | Staphylococcus epidermidis strain FDAARGOS_529 chromosome, complete genome | blastn | 27100 | 496 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 8295379 | 8295379 | PRJNA672101_S_NODE_34967_length_219_cov_7.842466_g34936_i0 | PRJNA672101 | 34967 | 219 | 7.842466 | 17.17500054 | Bacillus sp. Y1 | 352858 | Bacteria | Bacteria | 405 | 1.29e-108 | NTclustered | gi|1480120062|gb|CP030028.1| | 352858 | g34936 | i0 | 100 | 1113.01369863014 | 219 | 0 | 100 | 0 | 1 | 219 | 704794 | 704576 | Bacillus sp. Y1 chromosome, complete genome | blastn | 243750 | 405 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Bacillus | Bacillus sp. Y1 | ||
| 8295439 | 8295439 | PRJNA672101_S_NODE_8467_length_362_cov_3.048443_g8436_i0 | PRJNA672101 | 8467 | 362 | 3.048443 | 11.03536366 | Finegoldia magna | 1260 | Bacteria | Bacteria | 647 | 0 | NTclustered | gi|2722736583|dbj|AP031486.1| | 1260 | g8436 | i0 | 98.895 | 6.95027624309392 | 362 | 4 | 100 | 0 | 1 | 362 | 338510 | 338149 | Finegoldia magna NBRC 113804 DNA, complete genome: sequence1 | blastn | 2516 | 647 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Finegoldia | Finegoldia magna | ||
| 10094174 | 10094174 | PRJNA672101_S_NODE_4948_length_408_cov_5.913433_g4917_i0 | PRJNA672101 | 4948 | 408 | 5.913433 | 24.12680664 | Streptococcus | 1301 | Bacteria | Bacteria | 686 | 0 | NTclustered | gi|2288405307|gb|CP076703.1| | 1335 | g4917 | i0 | 100 | 490.120098039216 | 371 | 0 | 91 | 0 | 1 | 371 | 19024 | 19394 | Streptococcus equinus strain S1 chromosome, complete genome | blastn | 199969 | 686 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus equinus | ||
| 12120993 | 12120993 | PRJNA672101_S_NODE_14290_length_316_cov_15.534979_g14259_i0 | PRJNA672101 | 14290 | 316 | 15.534979 | 49.09053364 | Lachnospiraceae bacterium | 1898203 | Bacteria | Bacteria | 405 | 1.97e-108 | NTclustered | gi|2318985229|gb|CP107204.1| | 1898203 | g14259 | i0 | 90.127 | 459.939873417722 | 314 | 28 | 99 | 2 | 4 | 316 | 51734 | 51423 | MAG: Lachnospiraceae bacterium isolate KR001_MFL_0129 chromosome, complete genome | blastn | 145341 | 405 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Lachnospiraceae bacterium | |||
| 12644840 | 12644840 | PRJNA672101_S_NODE_70_length_1227_cov_42.414211_g61_i0 | PRJNA672101 | 70 | 1227 | 42.414211 | 520.42236897 | Clostridium | 1485 | Bacteria | Bacteria | 1903 | 0 | NTclustered | gi|2260370548|gb|CP099799.1| | 1504 | g61 | i0 | 95.195 | 950.980440097799 | 1207 | 52 | 98 | 4 | 23 | 1227 | 232214 | 233416 | Clostridium septicum strain RMA 8861 chromosome, complete genome | blastn | 1166853 | 1903 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium septicum | ||
| 13396112 | 13396112 | PRJNA672101_S_NODE_31671_length_244_cov_2.678363_g31640_i0 | PRJNA672101 | 31671 | 244 | 2.678363 | 6.53520572 | Streptococcus sanguinis | 1305 | Bacteria | Bacteria | 440 | 4.019999999999999e-119 | NTclustered | gi|1854466684|gb|CP054570.1| | 1305 | g31640 | i0 | 99.18 | 99.9754098360656 | 244 | 2 | 100 | 0 | 1 | 244 | 2001815 | 2001572 | Streptococcus sanguinis strain FDAARGOS_770 chromosome, complete genome | blastn | 24394 | 440 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus sanguinis | ||
| 15194093 | 15194093 | PRJNA672101_S_NODE_18512_length_292_cov_2.776256_g18481_i0 | PRJNA672101 | 18512 | 292 | 2.776256 | 8.10666752 | root | 1 | Root_unresolved | Root_unresolved | 523 | 4.769999999999998e-144 | NTclustered | gi|2179631034|gb|CP090928.1| | 1282 | g18481 | i0 | 98.973 | 126.215753424658 | 292 | 3 | 100 | 0 | 1 | 292 | 380 | 671 | Staphylococcus epidermidis strain 48 plasmid pSE48-4, complete sequence | blastn | 36855 | 523 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus epidermidis | ||
| 17220111 | 17220111 | PRJNA672101_S_NODE_3934_length_430_cov_3.747899_g3903_i0 | PRJNA672101 | 3934 | 430 | 3.747899 | 16.1159657 | Anaerococcus sp. WGS1596 | 3366806 | Bacteria | Bacteria | 219 | 3.869999999999999e-52 | NTclustered | gi|2831295055|gb|CP170995.1| | 3366806 | g3903 | i0 | 78.036 | 0.9 | 387 | 57 | 86 | 12 | 9 | 379 | 1562769 | 1563143 | Anaerococcus sp. WGS1596 chromosome, complete genome | blastn | 387 | 219 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus sp. WGS1596 | ||
| 19017243 | 19017243 | PRJNA672101_S_NODE_8855_length_358_cov_6.792982_g8824_i0 | PRJNA672101 | 8855 | 358 | 6.792982 | 24.31887556 | Veillonella | 29465 | Bacteria | Bacteria | 651 | 0 | NTclustered | gi|2326448795|gb|CP110418.1| | 423477 | g8824 | i0 | 99.441 | 49.231843575419 | 358 | 2 | 100 | 0 | 1 | 358 | 1690242 | 1690599 | Veillonella rogosae strain KCOM 3468 chromosome, complete genome | blastn | 17625 | 651 | 1 | Bacteria | Bacillati | Bacillota | Negativicutes | Veillonellales | Veillonellaceae | Veillonella | Veillonella rogosae | ||
| 19768611 | 19768611 | PRJNA672101_S_NODE_13996_length_318_cov_5.085714_g13965_i0 | PRJNA672101 | 13996 | 318 | 5.085714 | 16.17257052 | Vagococcus carniphilus | 218144 | Bacteria | Bacteria | 100 | 1.05e-16 | NTclustered | gi|1898528070|gb|CP060720.1| | 218144 | g13965 | i0 | 75.455 | 1.93710691823899 | 220 | 47 | 69 | 5 | 82 | 299 | 672347 | 672133 | Vagococcus carniphilus strain ATCC BAA-640 chromosome, complete genome | blastn | 616 | 100 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Enterococcaceae | Vagococcus | Vagococcus carniphilus | ||
| 20291939 | 20291939 | PRJNA672101_S_NODE_27916_length_253_cov_1.283333_g27885_i0 | PRJNA672101 | 27916 | 253 | 1.283333 | 3.24683249 | Streptococcus | 1301 | Bacteria | Bacteria | 420 | 5.46e-113 | NTclustered | gi|674114364|gb|CP007573.1| | 1328 | g27885 | i0 | 99.565 | 7.25691699604743 | 230 | 1 | 91 | 0 | 1 | 230 | 168899 | 168670 | Streptococcus anginosus strain SA1, complete genome | blastn | 1836 | 420 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus anginosus | ||
| 21044658 | 21044658 | PRJNA672101_S_NODE_8597_length_361_cov_2.406250_g8566_i0 | PRJNA672101 | 8597 | 361 | 2.40625 | 8.6865625 | Anaerococcus nagyae | 1755241 | Bacteria | Bacteria | 634 | 2.6699999999999993e-177 | NTclustered | gi|2722731751|dbj|AP031484.1| | 1755241 | g8566 | i0 | 98.338 | 572.434903047091 | 361 | 6 | 100 | 0 | 1 | 361 | 121930 | 121570 | Anaerococcus nagyae NBRC 113824 DNA, complete genome: sequence1 | blastn | 206649 | 634 | 1 | Bacteria | Bacillati | Bacillota | Tissierellia | Tissierellales | Peptoniphilaceae | Anaerococcus | Anaerococcus nagyae | ||
| 23594948 | 23594948 | PRJNA672101_S_NODE_4259_length_422_cov_11.770774_g4228_i0 | PRJNA672101 | 4259 | 422 | 11.770774 | 49.67266628 | uncultured Clostridium sp. | 59620 | Bacteria | Bacteria | 643 | 5.269999999999998e-180 | NTclustered | gi|1899225201|gb|MT967673.1| | 59620 | g4228 | i0 | 95.739 | 839.632701421801 | 399 | 17 | 95 | 0 | 24 | 422 | 2236 | 1838 | Uncultured Clostridium sp. clone asv_172_2236 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence | blastn | 354325 | 643 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | uncultured Clostridium sp. | ||
| 24868360 | 24868360 | PRJNA672101_S_NODE_7340_length_374_cov_4.112957_g7309_i0 | PRJNA672101 | 7340 | 374 | 4.112957 | 15.38245918 | Chryseomicrobium aureum | 1441723 | Bacteria | Bacteria | 658 | 0 | NTclustered | gi|2831304778|gb|CP171117.1| | 1441723 | g7309 | i0 | 98.4 | 87.3823529411765 | 375 | 5 | 100 | 1 | 1 | 374 | 261131 | 261505 | Chryseomicrobium aureum strain WGS1526 chromosome, complete genome | blastn | 32681 | 658 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Caryophanaceae | Chryseomicrobium | Chryseomicrobium aureum | ||
| 28692561 | 28692561 | PRJNA672101_S_NODE_15827_length_307_cov_1.470085_g15796_i0 | PRJNA672101 | 15827 | 307 | 1.470085 | 4.51316095 | Hydrogenispora ethanolica | 1082276 | Bacteria | Bacteria | 163 | 8.77e-46 | NR | WP_132015865.1 | 1082276 | g15796 | i0 | 71.6 | 8.96091205211726 | 102 | 29 | 99.7 | 0 | 306 | 1 | 378 | 479 | WP_132015865.1 decarboxylating NADP(+)-dependent phosphogluconate dehydrogenase [Hydrogenispora ethanolica] | diamond | 2751 | 163 | 1 | Bacteria | Bacillati | Bacillota | Hydrogenispora | Hydrogenispora ethanolica | |||||
| 28755487 | 28755487 | PRJNA672101_S_NODE_9427_length_353_cov_3.575000_g9396_i0 | PRJNA672101 | 9427 | 353 | 3.575 | 12.61975 | Clostridia bacterium | 2044939 | Bacteria | Bacteria | 59.7 | 1.55e-7 | NR | MFA5151318.1 | 2044939 | g9396 | i0 | 34.5 | 0.713881019830028 | 84 | 53 | 71.4 | 2 | 353 | 102 | 928 | 1009 | MFA5151318.1 hypothetical protein [Clostridia bacterium] | diamond | 252 | 59.7 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Clostridia bacterium | |||||
| 29639251 | 29639251 | PRJNA672101_S_NODE_13710_length_320_cov_3.380567_g13679_i0 | PRJNA672101 | 13710 | 320 | 3.380567 | 10.8178144 | Clostridium botulinum | 1491 | Bacteria | Bacteria | 43.5 | 0.0329 | NR | WP_222652759.1 | 1491 | g13679 | i0 | 51.6 | 0.871875 | 93 | 36 | 79.7 | 4 | 30 | 284 | 3 | 94 | WP_222652759.1 hypothetical protein, partial [Clostridium botulinum] | diamond | 279 | 43.5 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium botulinum | ||
| 31756859 | 31756859 | PRJNA672101_S_NODE_18757_length_291_cov_2.325688_g18726_i0 | PRJNA672101 | 18757 | 291 | 2.325688 | 6.76775208 | Eubacteriales bacterium ADMFC1 | 3385205 | Bacteria | Bacteria | 49.3 | 2.93e-4 | NR | BFT87137.1 | 3385205 | g18726 | i0 | 33.7 | 0.917525773195876 | 89 | 54 | 86.6 | 2 | 286 | 35 | 130 | 218 | BFT87137.1 hypothetical protein ADMFC1_12150 [Eubacteriales bacterium ADMFC1] | diamond | 267 | 49.3 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Eubacteriales bacterium ADMFC1 | ||||
| 32610949 | 32610949 | PRJNA672101_S_NODE_29220_length_249_cov_6.238636_g29189_i0 | PRJNA672101 | 29220 | 249 | 6.238636 | 15.53420364 | Erysipelotrichaceae bacterium | 2049044 | Bacteria | Bacteria | 160 | 3.03e-46 | NR | HBS92032.1 | 2049044 | g29189 | i0 | 100 | 0.987951807228916 | 82 | 0 | 98.8 | 0 | 3 | 248 | 45 | 126 | HBS92032.1 hypothetical protein [Erysipelotrichaceae bacterium] | diamond | 246 | 160 | 1 | Bacteria | Bacillati | Bacillota | Erysipelotrichia | Erysipelotrichales | Erysipelotrichaceae | Erysipelotrichaceae bacterium | |||
| 32874701 | 32874701 | PRJNA672101_S_NODE_7460_length_373_cov_2.823333_g7429_i0 | PRJNA672101 | 7460 | 373 | 2.823333 | 10.53103209 | PVC group | 1783257 | Bacteria | Bacteria | 70.5 | 3.12e-11 | NR | WP_112881966.1 | 2081970 | g7429 | i0 | 38.4 | 2.67828418230563 | 112 | 59 | 86.1 | 4 | 368 | 48 | 795 | 901 | WP_112881966.1 UxaA family hydrolase [Paenibacillus montanisoli] | diamond | 999 | 71.2 | 0.990168539325843 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus montanisoli |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;