RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA672101", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA672101 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27694206 27694206 PRJNA672101_S_NODE_13084_length_324_cov_4.023904_g13053_i0 PRJNA672101 13084 324 4.023904 13.03744896 Opisthokonta 33154 Fungi Fungi 60.1 7.9e-8   NR KAK9765122.1 34480 g13053 i0 43.9 1.76851851851852 57 29 51.9 2 311 144 643 697 KAK9765122.1 DNA topoisomerase [Basidiobolus ranarum] diamond 573 60.5 0.993388429752066 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum
30693971 30693971 PRJNA672101_S_NODE_17913_length_295_cov_2.427928_g17882_i0 PRJNA672101 17913 295 2.427928 7.1623876 Eukaryota 2759 Fungi Fungi 162 1.38e-49   NR KAK9713048.1 34480 g17882 i0 85.4 13.6474576271186 89 13 90.5 0 287 21 30 118 KAK9713048.1 60S ribosomal protein L43 [Basidiobolus ranarum] diamond 4026 162 1 Eukaryota Opisthokonta Fungi Zoopagomycota Basidiobolomycetes Basidiobolales Basidiobolaceae Basidiobolus Basidiobolus ranarum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;