RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA672101", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA672101 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11369037 11369037 PRJNA672101_S_NODE_23889_length_268_cov_3.835897_g23858_i0 PRJNA672101 23889 268 3.835897 10.28020396 Fimbriimonas 1005038 Bacteria Bacteria 368 2.15e-97   NTclustered gi|663071213|gb|CP007139.1| 661478 g23858 i0 91.822 124.09328358209 269 15 100 4 1 268 28389 28651 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 33257 368 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
17743414 17743414 PRJNA672101_S_NODE_15734_length_307_cov_5.341880_g15703_i0 PRJNA672101 15734 307 5.34188 16.3995716 Fimbriimonas 1005038 Bacteria Bacteria 470 6.67e-128   NTclustered gi|663071213|gb|CP007139.1| 661478 g15703 i0 94.426 279.693811074919 305 17 99 0 1 305 29102 28798 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 85866 470 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;