RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA672101", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 4 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 4 ✖

bioproject 1

  • PRJNA672101 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26872546 26872546 PRJNA672101_S_NODE_28041_length_252_cov_4.301676_g28010_i0 PRJNA672101 28041 252 4.301676 10.84022352 Bacteria 2 Bacteria Bacteria 96.7 7.84e-24   NR MCY2994908.1 2026780 g28010 i0 56.6 7.79761904761905 83 34 98.8 2 249 1 7 87 MCY2994908.1 NADP-dependent oxidoreductase [Planctomycetota bacterium] diamond 1965 97.4 0.992813141683778 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
27018452 27018452 PRJNA672101_S_NODE_27602_length_254_cov_1.701657_g27571_i0 PRJNA672101 27602 254 1.701657 4.32220878 Planctomycetota bacterium 2026780 Bacteria Bacteria 107 3.56e-25   NR MBL8862461.1 2026780 g27571 i0 72.2 0.850393700787402 72 20 85 0 3 218 196 267 MBL8862461.1 hypothetical protein [Planctomycetota bacterium] diamond 216 107 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28850030 28850030 PRJNA672101_S_NODE_18168_length_294_cov_1.497738_g18137_i0 PRJNA672101 18168 294 1.497738 4.40334972 Planctomycetota bacterium 2026780 Bacteria Bacteria 81.6 6.05e-16   NR MCZ6684305.1 2026780 g18137 i0 45 1.02040816326531 100 49 95.9 2 294 13 60 159 MCZ6684305.1 6-bladed beta-propeller [Planctomycetota bacterium] diamond 300 81.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30207826 30207826 PRJNA672101_S_NODE_14172_length_317_cov_2.704918_g14141_i0 PRJNA672101 14172 317 2.704918 8.57459006 Planctomycetota bacterium 2026780 Bacteria Bacteria 81.6 1.94e-15   NR MEC9032943.1 2026780 g14141 i0 50.6 4.94006309148265 79 38 74.8 1 29 265 532 609 MEC9032943.1 Kazal-type serine protease inhibitor domain-containing protein [Planctomycetota bacterium] diamond 1566 81.6 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;