RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA672101", tax_clade = "Opisthokonta" and tax_phylum = "Chytridiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Chytridiomycota · 6 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 6 ✖

bioproject 1

  • PRJNA672101 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26967054 26967054 PRJNA672101_S_NODE_29382_length_249_cov_1.312500_g29351_i0 PRJNA672101 29382 249 1.3125 3.268125 Fungi 4751 Fungi Fungi 60.1 3.24e-8   NR KAJ3095540.1 261098 g29351 i0 45.9 5.80722891566265 74 38 88 2 249 31 1031 1103 KAJ3095540.1 hypothetical protein HDU97_006816 [Phlyctochytrium planicorne] diamond 1446 60.5 0.993388429752066 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytridiaceae Phlyctochytrium Phlyctochytrium planicorne
27346715 27346715 PRJNA672101_S_NODE_35143_length_213_cov_5.171429_g35112_i0 PRJNA672101 35143 213 5.171429 11.01514377 root 1 Root_unresolved Root_unresolved 43.1 0.0182   NR XP_031027242.1 1806994 g35112 i0 47.4 1.88732394366197 38 20 53.5 0 134 21 344 381 XP_031027242.1 uncharacterized protein SmJEL517_g00793 [Synchytrium microbalum] diamond 402 43.1 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Synchytriales Synchytriaceae Synchytrium Synchytrium microbalum
29323733 29323733 PRJNA672101_S_NODE_11049_length_339_cov_5.127820_g11018_i0 PRJNA672101 11049 339 5.12782 17.3833098 Chytriomyces confervae 246404 Fungi Fungi 99.4 1.39e-21   NR TPX76065.1 246404 g11018 i0 46.4 35.5309734513274 112 60 99.1 0 4 339 323 434 TPX76065.1 hypothetical protein CcCBS67573_g02677 [Chytriomyces confervae] diamond 12045 99.8 0.995991983967936 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Chytridiales Chytriomycetaceae Chytriomyces Chytriomyces confervae
29335796 29335796 PRJNA672101_S_NODE_7869_length_368_cov_5.840678_g7838_i0 PRJNA672101 7869 368 5.840678 21.49369504 Fungi 4751 Fungi Fungi 101 3.55e-22   NR KAI8808519.1 109936 g7838 i0 45.5 10.3858695652174 112 60 90.5 1 338 6 237 348 KAI8808519.1 hypothetical protein BJ742DRAFT_283256 [Cladochytrium replicatum] diamond 3822 102 0.990196078431373 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Cladochytriales Cladochytriaceae Cladochytrium Cladochytrium replicatum
29986968 29986968 PRJNA672101_S_NODE_32631_length_242_cov_2.733728_g32600_i0 PRJNA672101 32631 242 2.733728 6.61562176 Polychytrium aggregatum 110093 Fungi Fungi 95.9 7.21e-21   NR XP_052964298.1 110093 g32600 i0 60 1.66115702479339 70 26 84.3 1 234 31 596 665 XP_052964298.1 P-loop containing nucleoside triphosphate hydrolase protein [Polychytrium aggregatum] diamond 402 95.9 1 Eukaryota Opisthokonta Fungi Chytridiomycota Chytridiomycetes Polychytriales   Polychytrium Polychytrium aggregatum
31661825 31661825 PRJNA672101_S_NODE_14317_length_316_cov_3.802469_g14286_i0 PRJNA672101 14317 316 3.802469 12.01580204 Neocallimastix lanati (nom. inval.) 2767002 Fungi Fungi 94 2.04e-20   NR KAG4091337.1 2767002 g14286 i0 50.6 4.1772151898734204 83 40 78.8 1 66 314 92 173 KAG4091337.1 hypothetical protein H8356DRAFT_1708213 [Neocallimastix lanati (nom. inval.)] diamond 1320 94 1 Eukaryota Opisthokonta Fungi Chytridiomycota Neocallimastigomycetes Neocallimastigales Neocallimastigaceae Neocallimastix Neocallimastix lanati (nom. inval.)

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;