RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA672101" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 6 ✖

bioproject 1

  • PRJNA672101 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27902810 27902810 PRJNA672101_S_NODE_23625_length_269_cov_6.474490_g23594_i0 PRJNA672101 23625 269 6.47449 17.4163781 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 61.6 6.2e-10   NR KAJ3426809.1 1746091 g23594 i0 41.3 0.836431226765799 75 41 80.3 1 253 38 4 78 KAJ3426809.1 small gtp binding protein rab8 [Anaeramoeba flamelloides] diamond 225 61.6 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
28408221 28408221 PRJNA672101_S_NODE_20206_length_284_cov_3.649289_g20175_i0 PRJNA672101 20206 284 3.649289 10.36398076 Anaeramoeba ignava 1746090 Root_unresolved Root_unresolved 58.2 6.68e-8   NR KAJ5070284.1 1746090 g20175 i0 51.8 2.52464788732394 56 27 59.2 0 272 105 100 155 KAJ5070284.1 small rab-related gtpase [Anaeramoeba ignava] diamond 717 58.2 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba ignava
29260474 29260474 PRJNA672101_S_NODE_33309_length_241_cov_1.363095_g33278_i0 PRJNA672101 33309 241 1.363095 3.28505895 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 84 1.12e-16   NR KAJ4463101.1 342808 g33278 i0 50.6 1.05809128630705 85 35 97.1 1 3 236 843 927 KAJ4463101.1 putative lupus brain antigen [Paratrimastix pyriformis] diamond 255 84 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
29481368 29481368 PRJNA672101_S_NODE_21950_length_276_cov_4.551724_g21919_i0 PRJNA672101 21950 276 4.551724 12.56275824 Anaeramoeba flamelloides 1746091 Root_unresolved Root_unresolved 44.7 0.0117   NR KAJ3443460.1 1746091 g21919 i0 31.2 0.83695652173913 77 51 81.5 1 15 239 99 175 KAJ3443460.1 ankyrin repeat-containing protein [Anaeramoeba flamelloides] diamond 231 44.7 1 Eukaryota Metamonada         Anaeramoebidae Anaeramoeba Anaeramoeba flamelloides
29828956 29828956 PRJNA672101_S_NODE_35191_length_211_cov_6.137681_g35160_i0 PRJNA672101 35191 211 6.137681 12.95050691 Paratrimastix pyriformis 342808 Preaxostyla other_Eukaryota 52 2.08e-6   NR KAJ4453711.1 342808 g35160 i0 47.6 0.597156398104265 42 22 59.7 0 211 86 35 76 KAJ4453711.1 putative 60S acidic ribosomal protein P1 [Paratrimastix pyriformis] diamond 126 52 1 Eukaryota Metamonada   Preaxostyla     Paratrimastigidae Paratrimastix Paratrimastix pyriformis
30492543 30492543 PRJNA672101_S_NODE_5513_length_399_cov_2.953988_g5482_i0 PRJNA672101 5513 399 2.953988 11.78641212 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 57 2.14e-6   NR XP_068367071.1 1144522 g5482 i0 38.5 0.684210526315789 91 55 67.7 1 116 385 452 542 XP_068367071.1 uncharacterized protein TRFO_15837 [Tritrichomonas foetus] diamond 273 57 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;