RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA670521" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA670521 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29418363 29418363 PRJNA670521_P_NODE_57629_length_278_cov_1.502439_g56884_i0 PRJNA670521 57629 278 1.502439 4.17678042 Thermoplasmatota archaeon 2806419 Archaea Archaea 95.5 1.56e-20   NR MCU0798095.1 2806419 g56884 i0 54 0.938848920863309 87 39 93.9 1 15 275 483 568 MCU0798095.1 glycine--tRNA ligase [Thermoplasmatota archaeon] diamond 261 95.5 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon
30998050 30998050 PRJNA670521_P_NODE_38514_length_328_cov_1.686275_g37769_i0 PRJNA670521 38514 328 1.686275 5.530982 Thermoplasmata archaeon 1906666 Archaea Archaea 45.8 0.00817   NR HIH97985.1 1906666 g37769 i0 37 0.841463414634146 92 52 83.2 3 273 1 178 264 HIH97985.1 DNA topoisomerase (ATP-hydrolyzing) subunit B [Thermoplasmata archaeon] diamond 276 45.8 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata       Thermoplasmata archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;