RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA670521" and tax_phylum = "Microsporidia"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA670521 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28218469 28218469 PRJNA670521_P_NODE_81986_length_246_cov_0.890173_g81241_i0 PRJNA670521 81986 246 0.890173 2.18982558 Enterocytozoon bieneusi H348 481877 Fungi Fungi 75.5 6.41e-14   NR EED42595.1 481877 g81241 i0 46.3 1.95121951219512 80 43 97.6 0 242 3 5 84 EED42595.1 hypothetical protein EBI_26840, partial [Enterocytozoon bieneusi H348] diamond 480 75.5 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon bieneusi
28408195 28408195 PRJNA670521_P_NODE_81566_length_246_cov_0.890173_g80821_i0 PRJNA670521 81566 246 0.890173 2.18982558 Vairimorpha ceranae 40302 Fungi Fungi 53.1 8.18e-6   NR XP_024330643.1 40302 g80821 i0 40.2 5.0609756097561 82 43 92.7 2 17 244 553 634 XP_024330643.1 endochitinase [Vairimorpha ceranae] diamond 1245 53.1 1 Eukaryota Opisthokonta Fungi Microsporidia     Nosematidae Vairimorpha Vairimorpha ceranae
31516068 31516068 PRJNA670521_P_NODE_90436_length_242_cov_0.911243_g89691_i0 PRJNA670521 90436 242 0.911243 2.20520806 Eukaryota 2759 Fungi Fungi 67.8 4.9e-11   NR KAG0437506.1 279532 g89691 i0 45.7 9.80578512396694 70 35 86.8 1 216 7 102 168 KAG0437506.1 Eukaryotic peptide chain release factor subunit 1 [Dictyocoela muelleri] diamond 2373 68.2 0.994134897360704 Eukaryota Opisthokonta Fungi Microsporidia       Dictyocoela Dictyocoela muelleri
32799618 32799618 PRJNA670521_P_NODE_52440_length_290_cov_1.115207_g51695_i0 PRJNA670521 52440 290 1.115207 3.2341003 Enterocytozoon bieneusi H348 481877 Fungi Fungi 115 5.569999999999999e-28   NR EDQ31200.1 481877 g51695 i0 51 0.993103448275862 96 46 98.3 1 4 288 67 162 EDQ31200.1 leucyl aminopeptidase [Enterocytozoon bieneusi H348] diamond 288 115 1 Eukaryota Opisthokonta Fungi Microsporidia     Enterocytozoonidae Enterocytozoon Enterocytozoon bieneusi

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;