RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA670521", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 5 ✖

tax_phylum 1

  • Kitrinoviricota · 5 ✖

tax_kingdom 1

bioproject 1

  • PRJNA670521 · 5 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8291316 8291316 PRJNA670521_P_NODE_27_length_5661_cov_8.548318_g18_i0 PRJNA670521 27 5661 8.548318 483.92028198 Potexvirus marmormanihotis 3433851 Viruses Viruses 8421 0   NTclustered gi|1847771809|gb|KT002435.2| 39046 g18 i0 93.52 20.0823176117294 5664 361 100 6 1 5661 705 6365 Cassava common mosaic virus isolate Mcol22_1, complete genome blastn 113686 8421 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
8291606 8291606 PRJNA670521_P_NODE_8007_length_628_cov_4.540541_g7282_i0 PRJNA670521 8007 628 4.540541 28.51459748 Potexvirus marmormanihotis 3433851 Viruses Viruses 1022 0   NTclustered gi|1847771809|gb|KT002435.2| 39046 g7282 i0 96.019 14.937898089172 628 25 100 0 1 628 652 25 Cassava common mosaic virus isolate Mcol22_1, complete genome blastn 9381 1022 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
22315417 22315417 PRJNA670521_P_NODE_18_length_6376_cov_44.189116_g12_i0 PRJNA670521 18 6376 44.189116 2817.49803616 Potexvirus marmormanihotis 3433851 Viruses Viruses 10008 0   NTclustered gi|2851473175|gb|PQ497977.1| 39046 g12 i0 94.997 20.7964240903388 6376 319 100 0 1 6376 17 6392 Cassava common mosaic virus isolate BR-21GS-C3-251-6, complete genome blastn 132598 10008 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
23590907 23590907 PRJNA670521_P_NODE_19_length_6373_cov_16.364127_g12_i1 PRJNA670521 19 6373 16.364127 1042.88581371 Potexvirus marmormanihotis 3433851 Viruses Viruses 9915 0   NTclustered gi|2018315478|gb|MT279196.1| 39046 g12 i1 94.771 19.8562686332967 6368 333 99 0 6 6373 1 6368 Cassava common mosaic virus isolate BR, complete genome blastn 126544 9915 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
24864208 24864208 PRJNA670521_P_NODE_20_length_6357_cov_38.469446_g12_i2 PRJNA670521 20 6357 38.469446 2445.50268222 Potexvirus marmormanihotis 3433851 Viruses Viruses 9718 0   NTclustered gi|2851473175|gb|PQ497977.1| 39046 g12 i2 94.258 20.6005977662419 6357 365 100 0 1 6357 17 6373 Cassava common mosaic virus isolate BR-21GS-C3-251-6, complete genome blastn 130958 9718 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;