RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA670521" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA670521 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26682082 26682082 PRJNA670521_P_NODE_91801_length_241_cov_0.916667_g91056_i0 PRJNA670521 91801 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 104 6.76e-26   NR MAA51215.1 2026760 g91056 i0 57.1 3.88381742738589 77 33 95.9 0 4 234 3 79 MAA51215.1 steroid 5-alpha reductase [Fidelibacterota bacterium] diamond 936 104 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27997823 27997823 PRJNA670521_P_NODE_45745_length_307_cov_1.111111_g45000_i0 PRJNA670521 45745 307 1.111111 3.41111077 Fidelibacterota bacterium 2026760 Bacteria Bacteria 65.9 2.79e-10   NR MCF7902920.1 2026760 g45000 i0 34.6 5.19869706840391 104 60 95.8 3 12 305 15 116 MCF7902920.1 hypothetical protein [Fidelibacterota bacterium] diamond 1596 65.9 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;