RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA670521", tax_phylum = "Duplornaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA670521 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30219983 30219983 PRJNA670521_P_NODE_46172_length_306_cov_0.935622_g45427_i0 PRJNA670521 46172 306 0.935622 2.86300332 Ghabrivirales 2732540 Viruses Viruses 104 1.34e-23   NR UHS72436.1 1955172 g45427 i0 53.5 2.91176470588235 99 45 96.1 1 296 3 404 502 UHS72436.1 MAG: putative RNA-dependent RNA polymerase [Totiviridae sp.] diamond 891 104 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
32116931 32116931 PRJNA670521_P_NODE_17858_length_442_cov_1.252033_g17116_i0 PRJNA670521 17858 442 1.252033 5.53398586 Ghabrivirales 2732540 Viruses Viruses 60.5 2.03e-7   NR UCD53720.1 1955172 g17116 i0 32.1 1.85972850678733 140 75 91 5 1 402 393 518 UCD53720.1 MAG: RNA-dependent RNA polymerase, partial [Totiviridae sp.] diamond 822 60.8 0.995065789473684 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;