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contig_metadata

16 rows where bioproject = "PRJNA670521" and tax_phylum = "Brachiopoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Brachiopoda · 16 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA670521 · 16 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6268871 6268871 PRJNA670521_P_NODE_82585_length_246_cov_0.884393_g81840_i0 PRJNA670521 82585 246 0.884393 2.17560678 Metazoa 33208 Brachiopoda other_Eukaryota 151 1.61e-40   NR XP_013396956.1 7574 g81840 i0 90.1 49.2073170731707 81 8 98.8 0 244 2 111 191 XP_013396956.1 dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like [Lingula anatina] diamond 12105 152 0.993421052631579 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
8291412 8291412 PRJNA670521_P_NODE_52527_length_290_cov_1.018433_g51782_i0 PRJNA670521 52527 290 1.018433 2.9534557 Lingula anatina 7574 Brachiopoda other_Eukaryota 103 2.5699999999999998e-23   NR XP_013393991.1 7574 g51782 i0 61.1 4.82068965517241 95 37 98.3 0 286 2 38 132 XP_013393991.1 ATPase family AAA domain-containing protein 3-A [Lingula anatina] diamond 1398 103 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
12117335 12117335 PRJNA670521_P_NODE_3070_length_997_cov_10.535714_g1808_i1 PRJNA670521 3070 997 10.535714 105.04106858 Lingula anatina 7574 Brachiopoda other_Eukaryota 407 1.87e-108   NTclustered gi|919089027|ref|XM_013526062.1| 7574 g1808 i1 82.965 45.4463390170512 452 75 45 2 47 497 102 552 PREDICTED: Lingula anatina calmodulin (LOC106152471), transcript variant X2, mRNA blastn 45310 407 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
14667044 14667044 PRJNA670521_P_NODE_18892_length_431_cov_7.343575_g18150_i0 PRJNA670521 18892 431 7.343575 31.65080825 Metazoa 33208 Brachiopoda other_Eukaryota 243 1.7400000000000002e-79   NR XP_013395382.2 7574 g18150 i0 93.8 52.6009280742459 129 8 89.8 0 7 393 83 211 XP_013395382.2 ubiquitin-60S ribosomal protein L40 [Lingula anatina] diamond 22671 245 0.991836734693878 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
15940864 15940864 PRJNA670521_P_NODE_2273_length_1157_cov_6.559963_g1808_i0 PRJNA670521 2273 1157 6.559963 75.89877191 Lingula anatina 7574 Brachiopoda other_Eukaryota 394 1.6999999999999995e-104   NTclustered gi|919089025|ref|XM_013526060.1| 7574 g1808 i0 82.766 38.3630077787381 441 76 38 0 671 1111 543 103 PREDICTED: Lingula anatina calmodulin (LOC106152471), transcript variant X1, mRNA blastn 44386 394 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
24116858 24116858 PRJNA670521_P_NODE_8739_length_603_cov_1.854717_g8009_i0 PRJNA670521 8739 603 1.854717 11.18394351 Metazoa 33208 Brachiopoda other_Eukaryota 56.5 0.005   NTclustered gi|919041215|ref|XM_013548457.1| 7574 g8009 i0 100 1.79436152570481 30 0 5 0 113 142 1939 1910 PREDICTED: Lingula anatina zinc finger protein 236 (LOC106169102), transcript variant X2, mRNA blastn 1082 56.5 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26650305 26650305 PRJNA670521_P_NODE_20341_length_418_cov_1.785507_g19598_i0 PRJNA670521 20341 418 1.785507 7.46341926 Metazoa 33208 Brachiopoda other_Eukaryota 194 1.97e-59   NR XP_013387556.1 7574 g19598 i0 71.9 19.9306220095694 139 39 99.8 0 418 2 5 143 XP_013387556.1 V-type proton ATPase subunit D [Lingula anatina] diamond 8331 194 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
26923550 26923550 PRJNA670521_P_NODE_26862_length_376_cov_0.732673_g26118_i0 PRJNA670521 26862 376 0.732673 2.75485048 Lingula anatina 7574 Brachiopoda other_Eukaryota 118 1.76e-28   NR XP_013391427.1 7574 g26118 i0 47.6 0.98936170212766 124 60 98.1 2 3 371 71 190 XP_013391427.1 lysophospholipid acyltransferase 5 [Lingula anatina] diamond 372 118 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27492537 27492537 PRJNA670521_P_NODE_10043_length_565_cov_1.189024_g9311_i0 PRJNA670521 10043 565 1.189024 6.7179856 Lingula anatina 7574 Brachiopoda other_Eukaryota 76.6 3.28e-13   NR XP_013384316.1 7574 g9311 i0 32 0.812389380530973 153 100 79.1 2 31 477 1 153 XP_013384316.1 surfeit locus protein 2 [Lingula anatina] diamond 459 76.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
27725865 27725865 PRJNA670521_P_NODE_44284_length_311_cov_0.970588_g43539_i0 PRJNA670521 44284 311 0.970588 3.01852868 Metazoa 33208 Brachiopoda other_Eukaryota 69.7 2.84e-11   NR XP_013385103.1 7574 g43539 i0 47.7 1.98713826366559 65 32 60.8 1 2 190 506 570 XP_013385103.1 neuroendocrine convertase 2-like [Lingula anatina] diamond 618 70.1 0.994293865905849 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28325288 28325288 PRJNA670521_P_NODE_68226_length_255_cov_1.269231_g67481_i0 PRJNA670521 68226 255 1.269231 3.23653905 Metazoa 33208 Brachiopoda other_Eukaryota 101 1.17e-22   NR XP_013384334.1 7574 g67481 i0 57.5 2.83529411764706 80 34 94.1 0 255 16 2022 2101 XP_013384334.1 uncharacterized protein LOC106154518 [Lingula anatina] diamond 723 102 0.990196078431373 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
28439823 28439823 PRJNA670521_P_NODE_35086_length_340_cov_1.153558_g34341_i0 PRJNA670521 35086 340 1.153558 3.9220972 Lingula anatina 7574 Brachiopoda other_Eukaryota 75.9 2.51e-13   NR XP_013414821.1 7574 g34341 i0 38 3.74117647058824 108 58 92.6 4 20 334 125 226 XP_013414821.1 uncharacterized protein LOC106176828 isoform X1 [Lingula anatina] diamond 1272 75.9 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
29639168 29639168 PRJNA670521_P_NODE_13930_length_490_cov_1.661871_g13191_i0 PRJNA670521 13930 490 1.661871 8.1431679 Lingula anatina 7574 Brachiopoda other_Eukaryota 233 1.53e-74   NR XP_013414812.1 7574 g13191 i0 67.1 1.93469387755102 158 51 96.1 1 18 488 23 180 XP_013414812.1 proteasome subunit beta type-6-like [Lingula anatina] diamond 948 233 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31199054 31199054 PRJNA670521_P_NODE_41895_length_318_cov_0.881633_g41150_i0 PRJNA670521 41895 318 0.881633 2.80359294 Metazoa 33208 Brachiopoda other_Eukaryota 48.9 6.55e-4   NR XP_013392762.1 7574 g41150 i0 31.2 7.92452830188679 109 65 93.4 1 318 22 1487 1595 XP_013392762.1 pecanex-like protein 1 [Lingula anatina] diamond 2520 49.3 0.991886409736308 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
31230903 31230903 PRJNA670521_P_NODE_13855_length_491_cov_1.471292_g13116_i0 PRJNA670521 13855 491 1.471292 7.22404372 Metazoa 33208 Brachiopoda other_Eukaryota 220 3.4000000000000007e-65   NR XP_013419927.1 7574 g13116 i0 67.5 18.9226069246436 163 52 99.6 1 491 3 409 570 XP_013419927.1 transketolase [Lingula anatina] diamond 9291 221 0.995475113122172 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina
32673703 32673703 PRJNA670521_P_NODE_72780_length_250_cov_0.870056_g72035_i0 PRJNA670521 72780 250 0.870056 2.17514 Lingula anatina 7574 Brachiopoda other_Eukaryota 46.6 0.00171   NR XP_013396908.1 7574 g72035 i0 33.3 0.684 57 38 68.4 0 235 65 217 273 XP_013396908.1 uncharacterized protein LOC106163774 [Lingula anatina] diamond 171 46.6 1 Eukaryota Opisthokonta Metazoa Brachiopoda Lingulata Lingulida Lingulidae Lingula Lingula anatina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;