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contig_metadata

16 rows where bioproject = "PRJNA670521" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 16 ✖

bioproject 1

  • PRJNA670521 · 16 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8291316 8291316 PRJNA670521_P_NODE_27_length_5661_cov_8.548318_g18_i0 PRJNA670521 27 5661 8.548318 483.92028198 Potexvirus marmormanihotis 3433851 Viruses Viruses 8421 0   NTclustered gi|1847771809|gb|KT002435.2| 39046 g18 i0 93.52 20.0823176117294 5664 361 100 6 1 5661 705 6365 Cassava common mosaic virus isolate Mcol22_1, complete genome blastn 113686 8421 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
8291606 8291606 PRJNA670521_P_NODE_8007_length_628_cov_4.540541_g7282_i0 PRJNA670521 8007 628 4.540541 28.51459748 Potexvirus marmormanihotis 3433851 Viruses Viruses 1022 0   NTclustered gi|1847771809|gb|KT002435.2| 39046 g7282 i0 96.019 14.937898089172 628 25 100 0 1 628 652 25 Cassava common mosaic virus isolate Mcol22_1, complete genome blastn 9381 1022 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
14667023 14667023 PRJNA670521_P_NODE_12_length_7224_cov_32.693609_g8_i0 PRJNA670521 12 7224 32.693609 2361.78631416 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2926 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8 i0 96.298 0.666112956810631 1783 61 67 5 13 1793 7108 5329 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4812 2926 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
15940838 15940838 PRJNA670521_P_NODE_13_length_7224_cov_29.761851_g8_i1 PRJNA670521 13 7224 29.761851 2149.99611624 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 2915 0   NTclustered gi|2551699335|gb|OK619588.1| 3063761 g8 i1 96.186 0.66625138427464 1783 63 67 5 5432 7212 5329 7108 Zebrafish picornavirus 2 isolate AU/2020 polyprotein gene, complete cds blastn 4813 2915 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2
22315417 22315417 PRJNA670521_P_NODE_18_length_6376_cov_44.189116_g12_i0 PRJNA670521 18 6376 44.189116 2817.49803616 Potexvirus marmormanihotis 3433851 Viruses Viruses 10008 0   NTclustered gi|2851473175|gb|PQ497977.1| 39046 g12 i0 94.997 20.7964240903388 6376 319 100 0 1 6376 17 6392 Cassava common mosaic virus isolate BR-21GS-C3-251-6, complete genome blastn 132598 10008 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
23590907 23590907 PRJNA670521_P_NODE_19_length_6373_cov_16.364127_g12_i1 PRJNA670521 19 6373 16.364127 1042.88581371 Potexvirus marmormanihotis 3433851 Viruses Viruses 9915 0   NTclustered gi|2018315478|gb|MT279196.1| 39046 g12 i1 94.771 19.8562686332967 6368 333 99 0 6 6373 1 6368 Cassava common mosaic virus isolate BR, complete genome blastn 126544 9915 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
24864208 24864208 PRJNA670521_P_NODE_20_length_6357_cov_38.469446_g12_i2 PRJNA670521 20 6357 38.469446 2445.50268222 Potexvirus marmormanihotis 3433851 Viruses Viruses 9718 0   NTclustered gi|2851473175|gb|PQ497977.1| 39046 g12 i2 94.258 20.6005977662419 6357 365 100 0 1 6357 17 6373 Cassava common mosaic virus isolate BR-21GS-C3-251-6, complete genome blastn 130958 9718 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Alphaflexiviridae Potexvirus Potexvirus marmormanihotis
24864244 24864244 PRJNA670521_P_NODE_27640_length_372_cov_1.030100_g26896_i0 PRJNA670521 27640 372 1.0301 3.831972 Zebrafish picornavirus 1 2304617 Viruses Viruses 569 7.899999999999997e-158   NTclustered gi|2500378199|ref|NC_076245.1| 2304617 g26896 i0 94.34 2.98387096774194 371 21 99 0 2 372 5563 5193 Zebrafish picornavirus 1 strain IDEXX/ZfPV-1/2017/USA, complete genome blastn 1110 569 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Zebrafish picornavirus 1
27050206 27050206 PRJNA670521_P_NODE_77162_length_248_cov_0.880000_g76417_i0 PRJNA670521 77162 248 0.88 2.1824 Rocky Mountain birnavirus 3077841 Viruses Viruses 157 1.2499999999999997e-42   NR WNN64190.1 3077841 g76417 i0 93.9 0.991935483870968 82 5 99.2 0 248 3 517 598 WNN64190.1 VP1 [Rocky Mountain birnavirus] diamond 246 157 1 Viruses   Orthornavirae       Birnaviridae   Rocky Mountain birnavirus
28041305 28041305 PRJNA670521_P_NODE_5_length_8668_cov_14.621640_g3_i0 PRJNA670521 5 8668 14.62164 1267.4037552 Zebrafish jaw picornavirus RQ13 Viruses Viruses 545 2.539999999999999e-153   NR ULF99604.1 RQ13 g3 i0 26.6 4.82741116751269 2338 1251 75.3 76 6913 386 310 2335 ULF99604.1 MAG: polyprotein, partial [Kobuvirus sp.] diamond 41844 548 0.994525547445255 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Kobuvirus Zebrafish jaw picornavirus
28660799 28660799 PRJNA670521_P_NODE_387_length_2347_cov_3.346526_g256_i0 PRJNA670521 387 2347 3.346526 78.54296522 Fish-associated picorna-like virus 3 3003959 Viruses Viruses 141 9.89e-31   NR UNY42191.1 3003959 g256 i0 27.9 0.521516829995739 408 245 48.7 11 500 1642 90 475 UNY42191.1 MAG: polyprotein, partial [Picornavirales sp.] diamond 1224 141 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Fish-associated picorna-like virus 3
28723913 28723913 PRJNA670521_P_NODE_76007_length_249_cov_0.875000_g75262_i0 PRJNA670521 76007 249 0.875 2.17875 Leviviridae sp. 2027243 Viruses Viruses 71.2 3.58e-12   NR UJQ85965.1 2027243 g75262 i0 75 0.530120481927711 44 11 53 0 248 117 275 318 UJQ85965.1 MAG: putative replicase protein [Leviviridae sp.] diamond 132 71.2 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.
29177998 29177998 PRJNA670521_P_NODE_11729_length_526_cov_1.019868_g10994_i0 PRJNA670521 11729 526 1.019868 5.36450568 Viruses 10239 Viruses Viruses 72 4.63e-11   NR UNY42007.1 1955153 g10994 i0 43 2.23574144486692 93 50 52.5 2 2 277 804 894 UNY42007.1 MAG: polyprotein 2 [Picornavirales sp.] diamond 1176 72 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Picornavirales sp.
29418354 29418354 PRJNA670521_P_NODE_289_length_2640_cov_2.918582_g189_i0 PRJNA670521 289 2640 2.918582 77.0505648 Chemarfal virus 127 3062889 Viruses Viruses 107 1.61e-19   NR WPR17966.1 3062889 g189 i0 27.3 0.390909090909091 344 219 38.4 9 2249 1236 1548 1866 WPR17966.1 MAG: hypothetical protein [Chemarfal virus 127] diamond 1032 107 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Chemarfal virus 127
30219983 30219983 PRJNA670521_P_NODE_46172_length_306_cov_0.935622_g45427_i0 PRJNA670521 46172 306 0.935622 2.86300332 Ghabrivirales 2732540 Viruses Viruses 104 1.34e-23   NR UHS72436.1 1955172 g45427 i0 53.5 2.91176470588235 99 45 96.1 1 296 3 404 502 UHS72436.1 MAG: putative RNA-dependent RNA polymerase [Totiviridae sp.] diamond 891 104 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.
32116931 32116931 PRJNA670521_P_NODE_17858_length_442_cov_1.252033_g17116_i0 PRJNA670521 17858 442 1.252033 5.53398586 Ghabrivirales 2732540 Viruses Viruses 60.5 2.03e-7   NR UCD53720.1 1955172 g17116 i0 32.1 1.85972850678733 140 75 91 5 1 402 393 518 UCD53720.1 MAG: RNA-dependent RNA polymerase, partial [Totiviridae sp.] diamond 822 60.8 0.995065789473684 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Totiviridae   Totiviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;