RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA670521", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA670521 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21040612 21040612 PRJNA670521_P_NODE_32237_length_351_cov_0.633094_g31492_i0 PRJNA670521 32237 351 0.633094 2.22215994 Mycoplasma tauri 547987 Bacteria Bacteria 56.5 0.003   NTclustered gi|1993604791|gb|CP070479.1| 547987 g31492 i0 100 0.0854700854700855 30 0 9 0 37 66 300233 300262 Mycoplasma tauri strain Zaradi2 chromosome, complete genome blastn 30 56.5 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma tauri
32295095 32295095 PRJNA670521_P_NODE_69439_length_252_cov_1.351955_g68694_i0 PRJNA670521 69439 252 1.351955 3.4069266 Mycoplasma capricolum 2095 Bacteria Bacteria 42 0.0311   NR WP_029333233.1 2095 g68694 i0 31.6 0.904761904761905 76 48 90.5 1 228 1 15 86 WP_029333233.1 hypothetical protein [Mycoplasma capricolum] diamond 228 42 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Mycoplasmatales Mycoplasmataceae Mycoplasma Mycoplasma capricolum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;