RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA670521", tax_kingdom = "Bacillati" and tax_phylum = "Candidatus Melainabacteria"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Melainabacteria · 3 ✖

tax_kingdom 1

  • Bacillati · 3 ✖

bioproject 1

  • PRJNA670521 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26765229 26765229 PRJNA670521_P_NODE_9581_length_577_cov_2.170635_g8849_i0 PRJNA670521 9581 577 2.170635 12.52456395 Candidatus Obscuribacter sp. 2711154 Bacteria Bacteria 142 3.0099999999999996e-35   NR MBK8219818.1 2711154 g8849 i0 41.7 2.80762564991334 180 98 93.6 1 574 35 471 643 MBK8219818.1 5-histidylcysteine sulfoxide synthase [Candidatus Obscuribacter sp.] diamond 1620 142 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales Candidatus Obscuribacteraceae Candidatus Obscuribacter Candidatus Obscuribacter sp.
27207894 27207894 PRJNA670521_P_NODE_45002_length_309_cov_1.211864_g44257_i0 PRJNA670521 45002 309 1.211864 3.74465976 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 49.7 3e-4   NR MBX9669365.1 2364082 g44257 i0 35.6 4.97087378640777 90 48 84.5 3 288 28 1 83 MBX9669365.1 protein kinase [Candidatus Obscuribacterales bacterium] diamond 1536 49.7 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium
31440473 31440473 PRJNA670521_P_NODE_65736_length_260_cov_1.470588_g64991_i0 PRJNA670521 65736 260 1.470588 3.8235288 Candidatus Obscuribacterales bacterium 2364082 Bacteria Bacteria 63.2 3e-9   NR MBY0549008.1 2364082 g64991 i0 36.7 0.911538461538462 79 50 91.2 0 23 259 70 148 MBY0549008.1 VWA domain-containing protein [Candidatus Obscuribacterales bacterium] diamond 237 63.2 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Candidatus Melainabacteria   Candidatus Obscuribacterales     Candidatus Obscuribacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;