RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA670521", tax_clade = "Sar" and tax_phylum = "Perkinsozoa"

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tax_superkingdom 1

tax_phylum 1

  • Perkinsozoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA670521 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26701683 26701683 PRJNA670521_P_NODE_48641_length_299_cov_1.362832_g47896_i0 PRJNA670521 48641 299 1.362832 4.07486768 Perkinsus marinus ATCC 5 31276 SAR_Eukaryotes SAR_Eukaryotes 147 1.6499999999999998e-42   NR XP_002778466.1 423536 g47896 i0 70.1 2.87959866220736 97 29 97.3 0 7 297 10 106 XP_002778466.1 cyclophilin, putative [Perkinsus marinus ATCC 50983] diamond 861 147 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus marinus
27176326 27176326 PRJNA670521_P_NODE_58182_length_277_cov_1.215686_g57437_i0 PRJNA670521 58182 277 1.215686 3.36745022 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 95.5 1.62e-20   NR KAF4699694.1 32597 g57437 i0 47.9 12.2166064981949 96 45 99.6 2 2 277 262 356 KAF4699694.1 phosphatidate cytidylyltransferase [Perkinsus olseni] diamond 3384 95.5 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
32465036 32465036 PRJNA670521_P_NODE_41519_length_319_cov_1.004065_g40774_i0 PRJNA670521 41519 319 1.004065 3.20296735 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 77.8 9.56e-16   NR KAF4713305.1 32597 g40774 i0 40.2 3.68652037617555 102 58 95.9 1 316 11 7 105 KAF4713305.1 hypothetical protein FOZ63_010488, partial [Perkinsus olseni] diamond 1176 78.2 0.994884910485933 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;