RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA670521", tax_clade = "Methanomada group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Methanomada group · 2 ✖

bioproject 1

  • PRJNA670521 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8291512 8291512 PRJNA670521_P_NODE_71347_length_251_cov_0.865169_g70602_i0 PRJNA670521 71347 251 0.865169 2.17157419 Methanothermococcus okinawensis 155863 Archaea Archaea 58.4 4.89e-4   NTclustered gi|334855522|gb|CP002792.1| 647113 g70602 i0 97.143 0.48605577689243 35 0 14 1 80 114 1187252 1187285 Methanothermococcus okinawensis IH1, complete genome blastn 122 58.4 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanococci Methanococcales Methanococcaceae Methanothermococcus Methanothermococcus okinawensis
30113163 30113163 PRJNA670521_P_NODE_18552_length_435_cov_1.237569_g17810_i0 PRJNA670521 18552 435 1.237569 5.38342515 Methanosphaera sp. 2666342 Archaea Archaea 185 1.36e-54   NR MEE3325635.1 2666342 g17810 i0 63.7 1.00689655172414 146 50 98.6 1 431 3 84 229 MEE3325635.1 C13 family peptidase [Methanosphaera sp.] diamond 438 185 1 Archaea Methanomada group Methanobacteriati Methanobacteriota Methanobacteria Methanobacteriales Methanobacteriaceae Methanosphaera Methanosphaera sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;