RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA670521", tax_clade = "Metamonada" and tax_phylum = "Fornicata"

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tax_superkingdom 1

tax_phylum 1

  • Fornicata · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA670521 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26923546 26923546 PRJNA670521_P_NODE_19642_length_424_cov_3.943020_g18899_i0 PRJNA670521 19642 424 3.94302 16.7184048 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 114 1.46e-29   NR GKT25485.1 2918883 g18899 i0 46.6 0.820754716981132 116 62 82.1 0 407 60 2 117 GKT25485.1 Ribosomal protein L14 like protein [Aduncisulcus paluster] diamond 348 114 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27239651 27239651 PRJNA670521_P_NODE_54623_length_285_cov_1.127358_g53878_i0 PRJNA670521 54623 285 1.127358 3.2129703 Carpediemonas membranifera 201153 Fornicata other_Eukaryota 83.2 2.04e-17   NR KAG9397400.1 201153 g53878 i0 43.8 3.68421052631579 89 50 93.7 0 275 9 57 145 KAG9397400.1 EF-hand domain pair [Carpediemonas membranifera] diamond 1050 83.2 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera
32389612 32389612 PRJNA670521_P_NODE_42819_length_315_cov_1.272727_g42074_i0 PRJNA670521 42819 315 1.272727 4.00909005 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 44.7 0.0185   NR GKT16851.1 2918883 g42074 i0 39.7 0.742857142857143 78 36 63.8 2 314 114 498 575 GKT16851.1 YaeB-like protein, partial [Aduncisulcus paluster] diamond 234 44.7 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;