RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA669701", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 4 ✖

tax_phylum 1

  • Thermoproteota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA669701 · 4 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15938091 15938091 PRJNA669701_P_NODE_131253_length_244_cov_0.900585_g130858_i0 PRJNA669701 131253 244 0.900585 2.1974274 root 1 Root_unresolved Root_unresolved 167 5.26e-52   NR WP_238027520.1 99938 g130858 i0 100 1.99180327868852 81 0 99.6 0 243 1 16 96 WP_238027520.1 S4 domain-containing protein, partial [Metallosphaera javensis (ex Hofmann et al. 2022)] diamond 486 167 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Metallosphaera Metallosphaera javensis (ex Hofmann et al. 2022)
27176267 27176267 PRJNA669701_P_NODE_70622_length_294_cov_2.407240_g70227_i0 PRJNA669701 70622 294 2.40724 7.0772856 Thermoproteota archaeon 2056631 Archaea Archaea 92 8.67e-22   NR MDQ6723465.1 2056631 g70227 i0 61.9 1.72448979591837 84 30 85.7 1 256 5 3 84 MDQ6723465.1 hypothetical protein [Thermoproteota archaeon] diamond 507 92 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
28565898 28565898 PRJNA669701_P_NODE_35727_length_394_cov_1.919003_g35332_i0 PRJNA669701 35727 394 1.919003 7.56087182 Thermoproteota archaeon 2056631 Archaea Archaea 81.3 1.82e-15   NR RDJ35203.1 2056631 g35332 i0 39.6 1.02030456852792 134 63 96.7 5 391 11 118 240 RDJ35203.1 MAG: hypothetical protein DWQ19_10305 [Thermoproteota archaeon] diamond 402 81.3 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon
32465024 32465024 PRJNA669701_P_NODE_94399_length_265_cov_1.593750_g94004_i0 PRJNA669701 94399 265 1.59375 4.2234375 Thermoproteati 1783275 Archaea Archaea 85.5 4.33e-17   NR MDQ3851458.1 2056631 g94004 i0 71.2 3.04528301886792 52 15 58.9 0 110 265 376 427 MDQ3851458.1 SLC13 family permease [Thermoproteota archaeon] diamond 807 86.3 0.990730011587486 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;