RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA669701" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA669701 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26796833 26796833 PRJNA669701_P_NODE_36441_length_391_cov_0.827044_g36046_i0 PRJNA669701 36441 391 0.827044 3.23374204 Synergistaceae bacterium 2053624 Bacteria Bacteria 103 1.8e-25   NR MFA7219248.1 2053624 g36046 i0 47 0.89769820971867 117 59 88.2 2 36 380 8 123 MFA7219248.1 hypothetical protein [Synergistaceae bacterium] diamond 351 103 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28534573 28534573 PRJNA669701_P_NODE_147847_length_226_cov_2.816993_g147452_i0 PRJNA669701 147847 226 2.816993 6.36640418 Synergistaceae bacterium 2053624 Bacteria Bacteria 50.1 2.34e-5   NR MDI3533296.1 2053624 g147452 i0 50 0.769911504424779 58 29 77 0 6 179 55 112 MDI3533296.1 hypothetical protein [Synergistaceae bacterium] diamond 174 50.1 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;