RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA669701" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA669701 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16466802 16466802 PRJNA669701_P_NODE_133653_length_243_cov_1.594118_g133258_i0 PRJNA669701 133653 243 1.594118 3.87370674 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 128 8.89e-35   NR HEX2483059.1 2072417 g133258 i0 89.3 0.925925925925926 75 8 92.6 0 243 19 160 234 HEX2483059.1 50S ribosomal protein L1 [Candidatus Methylomirabilota bacterium] diamond 225 128 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
27871226 27871226 PRJNA669701_P_NODE_136505_length_242_cov_2.934911_g136110_i0 PRJNA669701 136505 242 2.934911 7.10248462 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 77.8 1.02e-14   NR HXF75702.1 2072417 g136110 i0 54.7 0.929752066115702 75 33 93 1 226 2 12 85 HXF75702.1 Gfo/Idh/MocA family oxidoreductase [Candidatus Methylomirabilota bacterium] diamond 225 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28849909 28849909 PRJNA669701_P_NODE_123488_length_246_cov_1.531792_g123093_i0 PRJNA669701 123488 246 1.531792 3.76820832 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 57 3.62e-7   NR HVR36736.1 2072417 g123093 i0 32.4 0.902439024390244 74 50 90.2 0 239 18 146 219 HVR36736.1 SNF2-related protein [Candidatus Methylomirabilota bacterium] diamond 222 57 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;