RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA669701", tax_phylum = "Artverviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 1 ✖

tax_phylum 1

  • Artverviricota · 1 ✖

tax_kingdom 1

bioproject 1

  • PRJNA669701 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5738973 5738973 PRJNA669701_P_NODE_16265_length_585_cov_1.580078_g15875_i0 PRJNA669701 16265 585 1.580078 9.2434563 Gammaretrovirus murleu 3428959 Viruses Viruses 1059 0   NTclustered gi|1071348744|gb|KX173421.1| 11786 g15875 i0 99.316 95.7333333333333 585 4 100 0 1 585 2543 1959 Murine leukemia virus clone 26, complete sequence blastn 56004 1059 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;