RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA669701", tax_kingdom = "Fungi" and tax_phylum = "Blastocladiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Blastocladiomycota · 4 ✖

tax_kingdom 1

  • Fungi · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA669701 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018372 27018372 PRJNA669701_P_NODE_95562_length_264_cov_1.209424_g95167_i0 PRJNA669701 95562 264 1.209424 3.19287936 Blastocladiella emersonii ATCC 22665 1313167 Fungi Fungi 55.1 3.93e-7   NR KAI9168261.1 1313167 g95167 i0 57.8 0.511363636363636 45 18 50 1 2 133 75 119 KAI9168261.1 ergosterol biosynthesis protein [Blastocladiella emersonii ATCC 22665] diamond 135 55.1 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Blastocladiaceae Blastocladiella Blastocladiella emersonii
27524012 27524012 PRJNA669701_P_NODE_73003_length_290_cov_2.599078_g72608_i0 PRJNA669701 73003 290 2.599078 7.5373262 Paraphysoderma sedebokerense 1500003 Fungi Fungi 84 2.25e-17   NR KAI9144088.1 1500003 g72608 i0 48.8 1.68620689655172 86 41 85.9 2 262 14 1 86 KAI9144088.1 putative catechol O-methyltransferase [Paraphysoderma sedebokerense] diamond 489 84 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Physodermatomycetes Physodermatales Physodermataceae Paraphysoderma Paraphysoderma sedebokerense
28281584 28281584 PRJNA669701_P_NODE_96306_length_263_cov_1.526316_g95911_i0 PRJNA669701 96306 263 1.526316 4.01421108 Coelomomyces lativittatus 945690 Fungi Fungi 90.5 4.64e-20   NR KAJ1510042.1 945690 g95911 i0 51.2 4.82509505703422 84 41 95.8 0 254 3 3 86 KAJ1510042.1 26S proteasome regulatory subunit rpn6, partial [Coelomomyces lativittatus] diamond 1269 90.5 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus
32799560 32799560 PRJNA669701_P_NODE_49300_length_342_cov_1.144981_g48905_i0 PRJNA669701 49300 342 1.144981 3.91583502 Coelomomyces lativittatus 945690 Fungi Fungi 45.8 0.0075   NR KAJ1500491.1 945690 g48905 i0 43.5 1.13157894736842 62 35 54.4 0 130 315 110 171 KAJ1500491.1 MAPK protein hog1 [Coelomomyces lativittatus] diamond 387 45.8 1 Eukaryota Opisthokonta Fungi Blastocladiomycota Blastocladiomycetes Blastocladiales Coelomomycetaceae Coelomomyces Coelomomyces lativittatus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;