RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA669701", tax_clade = "PVC group" and tax_phylum = "Chlamydiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 2 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 2 ✖

bioproject 1

  • PRJNA669701 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23588961 23588961 PRJNA669701_P_NODE_69999_length_295_cov_5.887387_g69604_i0 PRJNA669701 69999 295 5.887387 17.36779165 Chlamydiales bacterium QZY 2803004 Bacteria Bacteria 333 8.729999999999999e-87   NTclustered gi|1955632013|gb|MW471098.1| 2803004 g69604 i0 91.701 45.4033898305085 241 19 82 1 1 241 276 37 Chlamydiales bacterium QZY 16S ribosomal RNA gene, partial sequence blastn 13394 333 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium QZY
26765139 26765139 PRJNA669701_P_NODE_21301_length_509_cov_27.598624_g20906_i0 PRJNA669701 21301 509 27.598624 140.47699616 Chlamydiales bacterium 2047757 Bacteria Bacteria 177 1.6999999999999998e-53   NR MCP5470420.1 2047757 g20906 i0 62.9 0.889980353634578 151 56 89 0 509 57 3 153 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 453 177 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;