RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA669701", tax_clade = "Metamonada" and tax_phylum = "Preaxostyla"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Preaxostyla · 3 ✖

tax_clade 1

  • Metamonada · 3 ✖

bioproject 1

  • PRJNA669701 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18487725 18487725 PRJNA669701_P_NODE_136515_length_242_cov_2.852071_g136120_i0 PRJNA669701 136515 242 2.852071 6.90201182 Monocercomonoides exilis 2049356 Preaxostyla other_Eukaryota 52.8 0.022   NTclustered gi|2794977061|ref|XM_067879212.1| 2049356 g136120 i0 100 0.115702479338843 28 0 12 0 43 70 9132 9159 Monocercomonoides exilis putative Dual specificity phosphatase, catalytic domain (MONOS_8775), partial mRNA blastn 28 52.8 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Polymastigidae Monocercomonoides Monocercomonoides exilis
29733887 29733887 PRJNA669701_P_NODE_122990_length_246_cov_3.052023_g122595_i0 PRJNA669701 122990 246 3.052023 7.50797658 Streblomastix strix 222440 Preaxostyla other_Eukaryota 44.3 0.00292   NR KAA6373859.1 222440 g122595 i0 33.3 2.21951219512195 60 40 73.2 0 22 201 41 100 KAA6373859.1 MAG: hypothetical protein EZS28_030614 [Streblomastix strix] diamond 546 44.3 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix
31073187 31073187 PRJNA669701_P_NODE_108135_length_251_cov_0.865169_g107740_i0 PRJNA669701 108135 251 0.865169 2.17157419 root 1 Root_unresolved Root_unresolved 107 2.9299999999999993e-28   NR KAA6379614.1 222440 g107740 i0 59 3.90836653386454 83 34 99.2 0 249 1 7 89 KAA6379614.1 MAG: hypothetical protein EZS28_024857 [Streblomastix strix] diamond 981 107 1 Eukaryota Metamonada   Preaxostyla   Oxymonadida Streblomastigidae Streblomastix Streblomastix strix

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;