RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA669701", tax_clade = "Haptista" and tax_superkingdom = "Eukaryota"

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tax_superkingdom 1

  • Eukaryota · 2 ✖

tax_phylum 1

tax_clade 1

  • Haptista · 2 ✖

bioproject 1

  • PRJNA669701 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27650406 27650406 PRJNA669701_P_NODE_126784_length_245_cov_1.686047_g126389_i0 PRJNA669701 126784 245 1.686047 4.13081515 Chrysochromulina tobinii 1460289 Haptophyta other_Eukaryota 74.7 9.52e-15   NR KOO22770.1 1460289 g126389 i0 65.6 0.746938775510204 61 21 74.7 0 184 2 18 78 KOO22770.1 40s ribosomal protein [Chrysochromulina tobinii] diamond 183 74.7 1 Eukaryota Haptista   Haptophyta   Prymnesiales Chrysochromulinaceae Chrysochromulina Chrysochromulina tobinii
31440423 31440423 PRJNA669701_P_NODE_93536_length_266_cov_1.533679_g93141_i0 PRJNA669701 93536 266 1.533679 4.07958614 Prymnesium sp. 2812485 Haptophyta other_Eukaryota 47 0.00147   NR KAL3911618.1 2812485 g93141 i0 37.5 2.17669172932331 64 40 72.2 0 9 200 188 251 KAL3911618.1 MAG: hypothetical protein SGPRY_008625 [Prymnesium sp.] diamond 579 47 1 Eukaryota Haptista   Haptophyta   Prymnesiales Prymnesiaceae Prymnesium Prymnesium sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;