RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA669701", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA669701 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27851608 27851608 PRJNA669701_P_NODE_39804_length_375_cov_1.400662_g39409_i0 PRJNA669701 39804 375 1.400662 5.2524825 Bacteria 2 Bacteria Bacteria 209 3.23e-63   NR MBL7650037.1 2030809 g39409 i0 78.2 9.896 124 27 99.2 0 3 374 118 241 MBL7650037.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 3711 211 0.990521327014218 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
28818225 28818225 PRJNA669701_P_NODE_76148_length_287_cov_0.878505_g75753_i0 PRJNA669701 76148 287 0.878505 2.52130935 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 130 3.29e-33   NR MFM1921279.1 2030809 g75753 i0 64.2 0.993031358885017 95 34 99.3 0 287 3 229 323 MFM1921279.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 285 130 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;