RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA669701", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA669701 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27239591 27239591 PRJNA669701_P_NODE_58803_length_318_cov_0.848980_g58408_i0 PRJNA669701 58803 318 0.84898 2.6997564 Candidatus Cloacimonas acidaminovorans 456827 Bacteria Bacteria 109 8.77e-27   NR HNV63398.1 456827 g58408 i0 55.7 0.830188679245283 88 39 83 0 318 55 183 270 HNV63398.1 FkbM family methyltransferase [Candidatus Cloacimonas acidaminovorans] diamond 264 109 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales Candidatus Cloacimonadaceae Candidatus Cloacimonas Candidatus Cloacimonas acidaminovorans
31123935 31123935 PRJNA669701_P_NODE_143875_length_238_cov_3.066667_g143480_i0 PRJNA669701 143875 238 3.066667 7.29866746 Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-3 2013735 Bacteria Bacteria 60.1 2.51e-8   NR PKN73781.1 2013735 g143480 i0 48.2 1.43697478991597 56 29 70.6 0 171 4 243 298 PKN73781.1 MAG: hypothetical protein CVU50_00935 [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-3] diamond 342 60.1 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-3
32673608 32673608 PRJNA669701_P_NODE_119560_length_247_cov_3.752874_g119165_i0 PRJNA669701 119560 247 3.752874 9.26959878 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 46.2 0.0017   NR MFA7057162.1 3060593 g119165 i0 47.5 1.33603238866397 40 21 48.6 0 1 120 149 188 MFA7057162.1 tetratricopeptide repeat protein [Candidatus Cloacimonadales bacterium] diamond 330 46.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;