RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA669701", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Firestoneibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Firestoneibacteriota · 1 ✖

tax_clade 1

  • Bacteria candidate phyla · 1 ✖

bioproject 1

  • PRJNA669701 · 1 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30587009 30587009 PRJNA669701_P_NODE_77613_length_285_cov_1.136792_g77218_i0 PRJNA669701 77613 285 1.136792 3.2398572 Candidatus Firestoneibacteriota bacterium 2715505 Bacteria Bacteria 57 6.11e-7   NR MEK6646084.1 2715505 g77218 i0 36.2 3.32631578947368 94 58 97.9 2 7 285 383 475 MEK6646084.1 DUF2723 domain-containing protein [Candidatus Firestonebacteria bacterium] diamond 948 57 1 Bacteria Bacteria candidate phyla   Candidatus Firestoneibacteriota         Candidatus Firestoneibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;