RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA667863" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA667863 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19760978 19760978 PRJNA667863_P_NODE_6356_length_284_cov_3.440758_g6322_i0 PRJNA667863 6356 284 3.440758 9.77175272 Minisyncoccota bacterium 2053589 Bacteria Bacteria 139 1.5899999999999999e-40   NR MDR3570670.1 2053589 g6322 i0 91.8 0.77112676056338 73 6 77.1 0 226 8 6 78 MDR3570670.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 219 139 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28692409 28692409 PRJNA667863_P_NODE_13747_length_246_cov_4.445087_g13713_i0 PRJNA667863 13747 246 4.445087 10.93491402 Minisyncoccota bacterium 2053589 Bacteria Bacteria 120 2.26e-33   NR MDR3570671.1 2053589 g13713 i0 75.6 1 82 19 98.8 1 245 3 13 94 MDR3570671.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 246 120 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;