RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA667863" and tax_phylum = "Kiritimatiellota"

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tax_superkingdom 1

tax_phylum 1

  • Kiritimatiellota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA667863 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28692417 28692417 PRJNA667863_P_NODE_5907_length_289_cov_1.208333_g5873_i0 PRJNA667863 5907 289 1.208333 3.49208237 Kiritimatiellia bacterium 2212473 Bacteria Bacteria 85.1 8e-17   NR MFA7158874.1 2212473 g5873 i0 55.8 3.94463667820069 77 33 78.9 1 61 288 2 78 MFA7158874.1 NAD(P)-dependent oxidoreductase [Kiritimatiellia bacterium] diamond 1140 85.1 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia       Kiritimatiellia bacterium
32548000 32548000 PRJNA667863_P_NODE_6259_length_285_cov_2.995283_g6225_i0 PRJNA667863 6259 285 2.995283 8.53655655 Kiritimatiellales bacterium 2202731 Bacteria Bacteria 74.3 4.95e-13   NR MCF7844836.1 2202731 g6225 i0 57.1 0.663157894736842 63 20 58.9 2 9 176 1393 1455 MCF7844836.1 DUF4215 domain-containing protein [Kiritimatiellales bacterium] diamond 189 74.3 1 Bacteria PVC group Pseudomonadati Kiritimatiellota Kiritimatiellia Kiritimatiellales     Kiritimatiellales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;