RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA667863" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA667863 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4991847 4991847 PRJNA667863_P_NODE_4144_length_319_cov_1.890244_g4110_i0 PRJNA667863 4144 319 1.890244 6.02987836 Fimbriimonas 1005038 Bacteria Bacteria 466 9.01e-127   NTclustered gi|663071213|gb|CP007139.1| 661478 g4110 i0 93.103 260.877742946708 319 20 100 1 1 319 28713 28397 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 83220 466 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
30713461 30713461 PRJNA667863_P_NODE_17274_length_240_cov_2.760479_g17240_i0 PRJNA667863 17274 240 2.760479 6.6251496 Chthonomonadales bacterium 2282151 Bacteria Bacteria 47.4 8.24e-4   NR MCW3052353.1 2282151 g17240 i0 40 0.75 60 29 75 1 46 225 205 257 MCW3052353.1 ligase, RnlA [Chthonomonadales bacterium] diamond 180 47.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
30851886 30851886 PRJNA667863_P_NODE_18654_length_226_cov_2.712418_g18620_i0 PRJNA667863 18654 226 2.712418 6.13006468 Bacillati 1783272 Bacteria Bacteria 77 4.45e-15   NR HZH97848.1 2682144 g18620 i0 50.7 2.66814159292035 71 32 90.3 1 23 226 99 169 HZH97848.1 alpha/beta hydrolase family protein [Fimbriimonadaceae bacterium] diamond 603 77.4 0.994832041343669 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;