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contig_metadata

33 rows where bioproject = "PRJNA667863", tax_clade = "Amoebozoa" and tax_phylum = "Discosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Discosea · 33 ✖

tax_clade 1

  • Amoebozoa · 33 ✖

bioproject 1

  • PRJNA667863 · 33 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1910194 1910194 PRJNA667863_P_NODE_1942_length_399_cov_2.263804_g1908_i0 PRJNA667863 1942 399 2.263804 9.03257796 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 556 6.64e-154   NTclustered gi|300078498|gb|GU001160.1| 5755 g1908 i0 92.269 35.4035087719298 401 17 99 8 6 399 7818 7425 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14126 556 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5737336 5737336 PRJNA667863_P_NODE_12925_length_248_cov_0.880000_g12891_i0 PRJNA667863 12925 248 0.88 2.1824 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 135 2.17e-27   NTclustered gi|470509261|ref|XM_004349682.1| 1257118 g12891 i0 86.29 3.40322580645161 124 17 50 0 1 124 171 48 Acanthamoeba castellanii str. Neff ribosomal protein S10p/S20e, putative (ACA1_034550), partial mRNA blastn 844 135 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
5737503 5737503 PRJNA667863_P_NODE_7345_length_275_cov_2.287129_g7311_i0 PRJNA667863 7345 275 2.287129 6.28960475 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 387 6.1e-103   NTclustered gi|470484649|ref|XM_004344039.1| 1257118 g7311 i0 92 99.8436363636364 275 22 100 0 1 275 5293 5567 Acanthamoeba castellanii str. Neff PremRNA processing splicing factor 8, putative (ACA1_054320), partial mRNA blastn 27457 387 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7012566 7012566 PRJNA667863_P_NODE_3306_length_340_cov_3.779026_g3272_i0 PRJNA667863 3306 340 3.779026 12.8486884 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 361 4.7e-95   NTclustered gi|300078498|gb|GU001160.1| 5755 g3272 i0 85.794 13.2058823529412 359 30 100 15 1 340 6464 6108 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4490 361 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
7012586 7012586 PRJNA667863_P_NODE_5406_length_295_cov_6.360360_g5372_i0 PRJNA667863 5406 295 6.36036 18.763062 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 333 8.729999999999999e-87   NTclustered gi|300078498|gb|GU001160.1| 5755 g5372 i0 87.291 13.7254237288136 299 28 100 9 1 295 7066 6774 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 4049 333 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
9562502 9562502 PRJNA667863_P_NODE_4288_length_316_cov_3.621399_g4254_i0 PRJNA667863 4288 316 3.621399 11.44362084 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 175 1.81e-50   NR XP_004341068.1 1257118 g4254 i0 81.4 2.90506329113924 102 19 96.8 0 8 313 7 108 XP_004341068.1 polyadenylate-binding protein family protein [Acanthamoeba castellanii str. Neff] diamond 918 175 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
17211966 17211966 PRJNA667863_P_NODE_13934_length_246_cov_1.335260_g13900_i0 PRJNA667863 13934 246 1.33526 3.2847396 root 1 Root_unresolved Root_unresolved 158 1.52e-44   NR P53490.1 5755 g13900 i0 97.5 4.9390243902439 81 2 98.8 0 2 244 131 211 P53490.1 RecName: Full=Actin-related protein 3; AltName: Full=Actin-like protein 3 [Acanthamoeba castellanii] diamond 1215 158 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19760985 19760985 PRJNA667863_P_NODE_6996_length_278_cov_2.326829_g6962_i0 PRJNA667863 6996 278 2.326829 6.46858462 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 157 9.02e-44   NR XP_004341068.1 1257118 g6962 i0 79.3 16.7589928057554 92 19 99.3 0 2 277 44 135 XP_004341068.1 polyadenylate-binding protein family protein [Acanthamoeba castellanii str. Neff] diamond 4659 157 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
19760994 19760994 PRJNA667863_P_NODE_7716_length_272_cov_3.748744_g7682_i0 PRJNA667863 7716 272 3.748744 10.19658368 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 159 1.72e-46   NR XP_004356442.1 1257118 g7682 i0 77.8 28.4889705882353 90 20 99.3 0 2 271 80 169 XP_004356442.1 20S proteasome alpha subunit C, putative [Acanthamoeba castellanii str. Neff] diamond 7749 159 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
22840890 22840890 PRJNA667863_P_NODE_10478_length_255_cov_1.565934_g10444_i0 PRJNA667863 10478 255 1.565934 3.9931317 Acanthamoeba 5754 Discosea other_Eukaryota 455 1.51e-123   NTclustered gi|2044079936|gb|MZ272128.1| 5756 g10444 i0 98.824 100.937254901961 255 3 100 0 1 255 1424 1170 Acanthamoeba sp. isolate AcW149 small subunit ribosomal RNA gene, partial sequence blastn 25739 455 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba sp.
23586839 23586839 PRJNA667863_P_NODE_819_length_545_cov_9.779661_g787_i0 PRJNA667863 819 545 9.779661 53.29915245 Acanthamoeba castellanii 5755 Discosea other_Eukaryota 737 0   NTclustered gi|300078498|gb|GU001160.1| 5755 g787 i0 91.15 18.5376146788991 565 18 100 19 1 545 5925 5373 Acanthamoeba castellanii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 10103 737 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27124902 27124902 PRJNA667863_P_NODE_9162_length_263_cov_1.052632_g9128_i0 PRJNA667863 9162 263 1.052632 2.76842216 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.2 4.72e-5   NR XP_004337133.1 1257118 g9128 i0 46.3 1.5171102661597 67 34 74.1 1 262 68 153 219 XP_004337133.1 cudA family protein [Acanthamoeba castellanii str. Neff] diamond 399 51.6 0.992248062015504 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27397835 27397835 PRJNA667863_P_NODE_9023_length_263_cov_2.705263_g8989_i0 PRJNA667863 9023 263 2.705263 7.11484169 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 101 1.32e-25   NR XP_004356768.1 1257118 g8989 i0 58.3 0.958174904942966 84 34 95.8 1 12 263 1 83 XP_004356768.1 uncharacterized protein ACA1_175430 [Acanthamoeba castellanii str. Neff] diamond 252 101 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27429494 27429494 PRJNA667863_P_NODE_18423_length_228_cov_2.774194_g18389_i0 PRJNA667863 18423 228 2.774194 6.32516232 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 46.2 0.00184   NR XP_004339151.1 1257118 g18389 i0 40.3 1.01315789473684 77 43 97.4 3 227 6 796 872 XP_004339151.1 lysosomal alphamannosidase [Acanthamoeba castellanii str. Neff] diamond 231 46.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
27808375 27808375 PRJNA667863_P_NODE_2564_length_367_cov_1.914966_g2530_i0 PRJNA667863 2564 367 1.914966 7.02792522 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 67.4 8.29e-12   NR XP_004353014.1 1257118 g2530 i0 52.4 1.0299727520436 63 30 51.5 0 69 257 2 64 XP_004353014.1 cruciform DNA binding protein, putative [Acanthamoeba castellanii str. Neff] diamond 378 67.4 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28123910 28123910 PRJNA667863_P_NODE_3685_length_330_cov_1.778210_g3651_i0 PRJNA667863 3685 330 1.77821 5.868093 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 123 3.93e-30   NR XP_004368076.1 1257118 g3651 i0 56.9 0.927272727272727 102 44 92.7 0 306 1 117 218 XP_004368076.1 hnRNPL/PTB/hephaestus splicing factor subfamily protein [Acanthamoeba castellanii str. Neff] diamond 306 123 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28534529 28534529 PRJNA667863_P_NODE_12987_length_248_cov_0.880000_g12953_i0 PRJNA667863 12987 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 88.2 3.98e-18   NR XP_004345824.1 1257118 g12953 i0 44.3 1.91129032258065 79 43 94.4 1 234 1 498 576 XP_004345824.1 uncharacterized protein ACA1_181690 [Acanthamoeba castellanii str. Neff] diamond 474 88.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28755354 28755354 PRJNA667863_P_NODE_13127_length_248_cov_0.880000_g13093_i0 PRJNA667863 13127 248 0.88 2.1824 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 52 2.11e-5   NR XP_004340143.1 1257118 g13093 i0 53.3 0.544354838709677 45 21 54.4 0 30 164 287 331 XP_004340143.1 uncharacterized protein ACA1_368240 [Acanthamoeba castellanii str. Neff] diamond 135 52 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28818180 28818180 PRJNA667863_P_NODE_648_length_600_cov_4.415560_g616_i0 PRJNA667863 648 600 4.41556 26.49336 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 59.7 5.54e-8   NR XP_004353014.1 1257118 g616 i0 59.2 0.245 49 20 24.5 0 552 406 2 50 XP_004353014.1 cruciform DNA binding protein, putative [Acanthamoeba castellanii str. Neff] diamond 147 59.7 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28818181 28818181 PRJNA667863_P_NODE_8528_length_267_cov_1.391753_g8494_i0 PRJNA667863 8528 267 1.391753 3.71598051 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 122 3.34e-30   NR XP_004339599.1 1257118 g8494 i0 68.2 0.98876404494382 88 28 98.9 0 266 3 354 441 XP_004339599.1 Ubox domain containing protein [Acanthamoeba castellanii str. Neff] diamond 264 122 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
28861967 28861967 PRJNA667863_P_NODE_10888_length_253_cov_1.250000_g10854_i0 PRJNA667863 10888 253 1.25 3.1625 root 1 Root_unresolved Root_unresolved 112 2.13e-28   NR XP_004367664.1 1257118 g10854 i0 59.5 3.98418972332016 84 34 99.6 0 252 1 154 237 XP_004367664.1 phytanoylCoA dioxygenase [Acanthamoeba castellanii str. Neff] diamond 1008 112 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29386980 29386980 PRJNA667863_P_NODE_18909_length_217_cov_25.562500_g18875_i0 PRJNA667863 18909 217 25.5625 55.470625 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 72 2.11e-14   NR XP_004353014.1 1257118 g18875 i0 59.3 1.67281105990783 59 24 81.6 0 182 6 5 63 XP_004353014.1 cruciform DNA binding protein, putative [Acanthamoeba castellanii str. Neff] diamond 363 72 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29481229 29481229 PRJNA667863_P_NODE_16510_length_242_cov_0.911243_g16476_i0 PRJNA667863 16510 242 0.911243 2.20520806 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 53.5 5.4e-6   NR XP_004341763.1 1257118 g16476 i0 78.8 2.04545454545455 33 7 40.9 0 100 2 211 243 XP_004341763.1 TolAlike protein [Acanthamoeba castellanii str. Neff] diamond 495 53.5 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29828798 29828798 PRJNA667863_P_NODE_11831_length_250_cov_0.870056_g11797_i0 PRJNA667863 11831 250 0.870056 2.17514 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 154 1.36e-44   NR XP_004333661.1 1257118 g11797 i0 85.4 0.984 82 12 98.4 0 250 5 76 157 XP_004333661.1 actin bundling protein [Acanthamoeba castellanii str. Neff] diamond 246 154 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
29923742 29923742 PRJNA667863_P_NODE_17771_length_234_cov_4.198758_g17737_i0 PRJNA667863 17771 234 4.198758 9.82509372 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 107 8.12e-26   NR XP_004356622.1 1257118 g17737 i0 61 0.987179487179487 77 30 98.7 0 2 232 16 92 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 231 107 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30461181 30461181 PRJNA667863_P_NODE_18453_length_228_cov_2.387097_g18419_i0 PRJNA667863 18453 228 2.387097 5.44258116 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 129 4.7e-34   NR XP_004367870.1 1257118 g18419 i0 80.3 1 76 15 100 0 1 228 75 150 XP_004367870.1 ribosomal protein L4/L1 family [Acanthamoeba castellanii str. Neff] diamond 228 129 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30650095 30650095 PRJNA667863_P_NODE_1313_length_453_cov_1.381579_g1279_i0 PRJNA667863 1313 453 1.381579 6.25855287 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 115 1.52e-28   NR XP_004335039.1 1257118 g1279 i0 42.3 0.986754966887417 149 84 98 2 446 3 70 217 XP_004335039.1 transloconassociated protein, putative [Acanthamoeba castellanii str. Neff] diamond 447 115 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
30871447 30871447 PRJNA667863_P_NODE_19334_length_204_cov_6.305344_g19300_i0 PRJNA667863 19334 204 6.305344 12.86290176 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 102 8.68e-25   NR XP_004333661.1 1257118 g19300 i0 72.6 0.911764705882353 62 17 91.2 0 186 1 1 62 XP_004333661.1 actin bundling protein [Acanthamoeba castellanii str. Neff] diamond 186 102 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
31819895 31819895 PRJNA667863_P_NODE_7677_length_273_cov_1.380000_g7643_i0 PRJNA667863 7677 273 1.38 3.7674 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 125 3.3799999999999995e-31   NR XP_004335656.1 1257118 g7643 i0 69.2 2 91 27 100 1 1 273 6 95 XP_004335656.1 splicing factor 3b subunit 3, putative [Acanthamoeba castellanii str. Neff] diamond 546 125 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32009878 32009878 PRJNA667863_P_NODE_14378_length_245_cov_1.790698_g14344_i0 PRJNA667863 14378 245 1.790698 4.3872101 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 100 4.4699999999999996e-23   NR XP_004335426.1 1257118 g14344 i0 68.2 0.808163265306122 66 20 79.6 1 196 2 120 185 XP_004335426.1 cathepsin L, putative [Acanthamoeba castellanii str. Neff] diamond 198 100 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32136497 32136497 PRJNA667863_P_NODE_18378_length_228_cov_14.174194_g18344_i0 PRJNA667863 18378 228 14.174194 32.31716232 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 71.6 3.51e-14   NR XP_004353014.1 1257118 g18344 i0 55.7 1.64473684210526 61 27 80.3 0 185 3 5 65 XP_004353014.1 cruciform DNA binding protein, putative [Acanthamoeba castellanii str. Neff] diamond 375 71.6 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32168267 32168267 PRJNA667863_P_NODE_18878_length_219_cov_4.465753_g18844_i0 PRJNA667863 18878 219 4.465753 9.77999907 Paramoeba perurans 437603 Discosea other_Eukaryota 68.6 2.12e-11   NR QWE91383.1 437603 g18844 i0 51.6 0.876712328767123 64 31 87.7 0 14 205 399 462 QWE91383.1 hypothetical protein [Paramoeba perurans] diamond 192 68.6 1 Eukaryota Amoebozoa   Discosea Flabellinia Dactylopodida Paramoebidae Paramoeba Paramoeba perurans
32484578 32484578 PRJNA667863_P_NODE_14299_length_246_cov_0.878613_g14265_i0 PRJNA667863 14299 246 0.878613 2.16138798 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 143 7.969999999999999e-40   NR XP_004356622.1 1257118 g14265 i0 82.7 0.98780487804878 81 14 98.8 0 244 2 161 241 XP_004356622.1 mitochondrial phosphate transporter, putative [Acanthamoeba castellanii str. Neff] diamond 243 143 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;