RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA666695", tax_phylum = "Thermoproteota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 6 ✖

tax_phylum 1

  • Thermoproteota · 6 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 6 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7540710 7540710 PRJNA666695_S_NODE_193106_length_151_cov_3.200000_g192012_i0 PRJNA666695 193106 151 3.2 4.832 Saccharolobus 2100760 Archaea Archaea 54.7 0.003   NTclustered gi|2064866271|gb|CP077713.1| 2286 g192012 i0 100 2.6887417218543 29 0 19 0 28 56 56261 56289 Saccharolobus shibatae strain S38A chromosome, complete genome blastn 406 54.7 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus shibatae
8283708 8283708 PRJNA666695_S_NODE_128307_length_194_cov_1.202614_g127213_i0 PRJNA666695 128307 194 1.202614 2.33307116 Sulfurisphaera ohwakuensis 69656 Archaea Archaea 52.8 0.017   NTclustered gi|1780177153|gb|CP045484.1| 69656 g127213 i0 100 0.304123711340206 28 0 14 0 95 122 1653432 1653405 Sulfurisphaera ohwakuensis strain TA-1 chromosome, complete genome blastn 59 52.8 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Sulfurisphaera Sulfurisphaera ohwakuensis
27188301 27188301 PRJNA666695_S_NODE_77582_length_246_cov_2.331707_g76488_i0 PRJNA666695 77582 246 2.331707 5.73599922 Archaea 2157 Archaea Archaea 47.8 2.07e-4   NR MEB3774791.1 2480821 g76488 i0 37.7 2.41463414634146 69 41 84.1 1 242 36 65 131 MEB3774791.1 CBS domain-containing protein [Desulfurococcales archaeon] diamond 594 48.1 0.993762993762994 Archaea   Thermoproteati Thermoproteota Thermoprotei Desulfurococcales     Desulfurococcales archaeon
29587967 29587967 PRJNA666695_S_NODE_195990_length_150_cov_1.440367_g194896_i0 PRJNA666695 195990 150 1.440367 2.1605505 root 1 Root_unresolved Root_unresolved 68.6 8.35e-12   NR WP_012712535.1 43080 g194896 i0 65.3 5.66 49 17 98 0 147 1 506 554 WP_012712535.1 alpha/beta hydrolase family protein [Saccharolobus islandicus] diamond 849 68.6 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus islandicus
30346915 30346915 PRJNA666695_S_NODE_98212_length_221_cov_4.477778_g97118_i0 PRJNA666695 98212 221 4.477778 9.89588938 root 1 Root_unresolved Root_unresolved 56.6 3.39e-7   NR WP_197490524.1 1891280 g97118 i0 33.8 4.710407239819 65 43 88.2 0 199 5 101 165 WP_197490524.1 alanine racemase [Saccharolobus sp. A20] diamond 1041 57 0.992982456140351 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Saccharolobus Saccharolobus sp. A20
31484337 31484337 PRJNA666695_S_NODE_127416_length_194_cov_2.797386_g126322_i0 PRJNA666695 127416 194 2.797386 5.42692884 Thermoproteati 1783275 Archaea Archaea 42 0.0355   NR MDQ3902637.1 2056631 g126322 i0 42 1.54639175257732 50 28 75.8 1 27 173 83 132 MDQ3902637.1 lysophospholipase [Thermoproteota archaeon] diamond 300 42 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;