RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA666695", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Peploviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9559905 9559905 PRJNA666695_S_NODE_17588_length_436_cov_4.070886_g16497_i0 PRJNA666695 17588 436 4.070886 17.74906296 Aurivirus haliotidmalaco1 3050290 Viruses Viruses 52.8 0.042   NTclustered gi|409191184|ref|NC_018874.1| 1241371 g16497 i0 100 0.0642201834862385 28 0 6 0 156 183 32769 32796 Abalone herpesvirus Victoria/AUS/2009, complete genome blastn 28 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Malacoherpesviridae Aurivirus Aurivirus haliotidmalaco1
25389393 25389393 PRJNA666695_S_NODE_26200_length_374_cov_28.570571_g25107_i0 PRJNA666695 26200 374 28.570571 106.85393554 root 1 Root_unresolved Root_unresolved 58.4 7.65e-4   NTclustered gi|2523364678|gb|OR001786.1| 320883 g25107 i0 100 2.23529411764706 31 0 8 0 344 374 100127 100097 Acipenserid herpesvirus 1 strain UC Davis, partial genome blastn 836 58.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Alloherpesviridae   Acipenserid herpesvirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;