RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA666695", tax_phylum = "Nitrososphaerota" and tax_superkingdom = "Archaea"

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analysis 2

tax_superkingdom 1

  • Archaea · 8 ✖

tax_phylum 1

  • Nitrososphaerota · 8 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 8 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1906896 1906896 PRJNA666695_S_NODE_140842_length_184_cov_1.930070_g139748_i0 PRJNA666695 140842 184 1.93007 3.5513288 uncultured marine thaumarchaeote KM3_54_G11 1456193 Archaea Archaea 54.7 0.004   NTclustered gi|663521873|gb|KF900939.1| 1456193 g139748 i0 100 0.157608695652174 29 0 16 0 24 52 23294 23266 Uncultured marine thaumarchaeote KM3_54_G11 genomic sequence blastn 29 54.7 1 Archaea   Thermoproteati Nitrososphaerota         uncultured marine thaumarchaeote KM3_54_G11
2438645 2438645 PRJNA666695_S_NODE_98202_length_221_cov_4.600000_g97108_i0 PRJNA666695 98202 221 4.6 10.166 Nitrosopumilus 338191 Archaea Archaea 52.8 0.02   NTclustered gi|1869221159|gb|CP026993.1| 1470066 g97108 i0 100 0.253393665158371 28 0 13 0 6 33 1421357 1421330 Nitrosopumilus cobalaminigenes strain HCA1 chromosome, complete genome blastn 56 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus cobalaminigenes
10836930 10836930 PRJNA666695_S_NODE_59589_length_274_cov_2.364807_g58495_i0 PRJNA666695 59589 274 2.364807 6.47957118 Candidatus Nitrosopumilus sp. SW 2508726 Archaea Archaea 52.8 0.025   NTclustered gi|1699461107|gb|CP035425.1| 2508726 g58495 i0 100 0.102189781021898 28 0 10 0 58 85 729328 729301 Candidatus Nitrosopumilus sp. SW chromosome, complete genome blastn 28 52.8 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Candidatus Nitrosopumilus sp. SW
27112961 27112961 PRJNA666695_S_NODE_24082_length_386_cov_7.211594_g22989_i0 PRJNA666695 24082 386 7.211594 27.83675284 Nitrososphaerota archaeon 2026795 Archaea Archaea 85.5 1.91e-16   NR MBI2938708.1 2026795 g22989 i0 39.2 2.72020725388601 130 64 91.7 6 5 358 415 541 MBI2938708.1 purple acid phosphatase [Nitrososphaerota archaeon] diamond 1050 85.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
27883245 27883245 PRJNA666695_S_NODE_82225_length_240_cov_2.080402_g81131_i0 PRJNA666695 82225 240 2.080402 4.9929648 root 1 Root_unresolved Root_unresolved 54.3 1.71e-6   NR HEX2614070.1 1971748 g81131 i0 36.4 2.35 66 42 82.5 0 240 43 67 132 HEX2614070.1 CBS domain-containing protein [Nitrososphaera sp.] diamond 564 54.3 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae Nitrososphaera Nitrososphaera sp.
28471199 28471199 PRJNA666695_S_NODE_140206_length_184_cov_4.643357_g139112_i0 PRJNA666695 140206 184 4.643357 8.54377688 Nitrososphaerota archaeon 2026795 Archaea Archaea 63.5 5.41e-10   NR MDG7002132.1 2026795 g139112 i0 59.5 0.684782608695652 42 17 68.5 0 184 59 23 64 MDG7002132.1 hypothetical protein [Nitrososphaerota archaeon] diamond 126 63.5 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
30144401 30144401 PRJNA666695_S_NODE_55332_length_282_cov_2.804979_g54238_i0 PRJNA666695 55332 282 2.804979 7.91004078 Nitrososphaerota archaeon 2026795 Archaea Archaea 80.9 1.74e-16   NR MEM2041632.1 2026795 g54238 i0 47.4 1.61702127659574 76 40 80.9 0 11 238 121 196 MEM2041632.1 RIO1 family regulatory kinase/ATPase [Nitrososphaerota archaeon] diamond 456 80.9 1 Archaea   Thermoproteati Nitrososphaerota         Nitrososphaerota archaeon
32799431 32799431 PRJNA666695_S_NODE_17940_length_432_cov_30.826087_g16849_i0 PRJNA666695 17940 432 30.826087 133.16869584 Nitrosopumilus sp. 2024843 Archaea Archaea 134 3.94e-33   NR MBA3284442.1 2024843 g16849 i0 47.9 1 144 74 99.3 1 2 430 398 541 MBA3284442.1 hypothetical protein [Nitrosopumilus sp.] diamond 432 134 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae Nitrosopumilus Nitrosopumilus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;