RNAquarium Metadata Server
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contig_metadata

15 rows where bioproject = "PRJNA666695", tax_phylum = "Kitrinoviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 15 ✖

tax_phylum 1

  • Kitrinoviricota · 15 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 15 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1908405 1908405 PRJNA666695_S_NODE_36062_length_333_cov_1.784247_g34968_i0 PRJNA666695 36062 333 1.784247 5.94154251 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.009   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g34968 i0 96.97 0.183183183183183 33 0 10 1 302 333 38 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
3181690 3181690 PRJNA666695_S_NODE_141923_length_183_cov_2.288732_g140829_i0 PRJNA666695 141923 183 2.288732 4.18837956 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.004   NTclustered gi|1995060321|gb|MN450069.1| 12164 g140829 i0 100 0.770491803278688 29 0 16 0 155 183 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3183081 3183081 PRJNA666695_S_NODE_3183_length_880_cov_28.550656_g2527_i0 PRJNA666695 3183 880 28.550656 251.2457728 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.025   NTclustered gi|1995060321|gb|MN450069.1| 12164 g2527 i0 100 0.0329545454545455 29 0 3 0 852 880 41 13 Carnation latent virus isolate KL, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
3184342 3184342 PRJNA666695_S_NODE_86983_length_234_cov_2.145078_g85889_i0 PRJNA666695 86983 234 2.145078 5.01948252 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g85889 i0 100 0.602564102564103 29 0 12 0 206 234 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
4458826 4458826 PRJNA666695_S_NODE_147904_length_179_cov_1.666667_g146810_i0 PRJNA666695 147904 179 1.666667 2.98333393 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.004   NTclustered gi|1995060321|gb|MN450069.1| 12164 g146810 i0 100 0.787709497206704 29 0 16 0 151 179 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
12111315 12111315 PRJNA666695_S_NODE_27470_length_368_cov_3.522936_g26377_i0 PRJNA666695 27470 368 3.522936 12.96440448 Carlavirus latensdianthi 3427766 Viruses Viruses 58.4 7.51e-4   NTclustered gi|1995060321|gb|MN450069.1| 12164 g26377 i0 100 0.388586956521739 31 0 8 0 338 368 43 13 Carnation latent virus isolate KL, complete genome blastn 143 58.4 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
14662546 14662546 PRJNA666695_S_NODE_95072_length_225_cov_1.907609_g93978_i0 PRJNA666695 95072 225 1.907609 4.29212025 Jujube closterovirus 1 3043313 Viruses Viruses 56.5 0.002   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g93978 i0 100 0.257777777777778 30 0 13 0 196 225 35 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 58 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
15935739 15935739 PRJNA666695_S_NODE_62593_length_268_cov_7.744493_g61499_i0 PRJNA666695 62593 268 7.744493 20.75524124 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.002   NTclustered gi|1995060321|gb|MN450069.1| 12164 g61499 i0 100 0.544776119402985 30 0 11 0 239 268 42 13 Carnation latent virus isolate KL, complete genome blastn 146 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
17208241 17208241 PRJNA666695_S_NODE_11354_length_518_cov_5.559748_g10293_i0 PRJNA666695 11354 518 5.559748 28.79949464 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.014   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g10293 i0 100 0.055984555984556 29 0 6 0 490 518 34 6 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 29 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
18483255 18483255 PRJNA666695_S_NODE_144655_length_181_cov_2.564286_g143561_i0 PRJNA666695 144655 181 2.564286 4.64135766 Carlavirus latensdianthi 3427766 Viruses Viruses 56.5 0.001   NTclustered gi|1995060321|gb|MN450069.1| 12164 g143561 i0 94.595 0.823204419889503 37 0 20 2 145 181 47 13 Carnation latent virus isolate KL, complete genome blastn 149 56.5 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
18484931 18484931 PRJNA666695_S_NODE_48395_length_297_cov_3.785156_g47301_i0 PRJNA666695 48395 297 3.785156 11.24191332 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.008   NTclustered gi|1995060321|gb|MN450069.1| 12164 g47301 i0 100 0.474747474747475 29 0 10 0 1 29 13 41 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
21033218 21033218 PRJNA666695_S_NODE_137457_length_187_cov_0.945205_g136363_i0 PRJNA666695 137457 187 0.945205 1.76753335 Carlavirus latensdianthi 3427766 Viruses Viruses 52.8 0.016   NTclustered gi|1995060321|gb|MN450069.1| 12164 g136363 i0 100 0.149732620320856 28 0 15 0 1 28 15 42 Carnation latent virus isolate KL, complete genome blastn 28 52.8 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi
21034690 21034690 PRJNA666695_S_NODE_33997_length_340_cov_4.719064_g32903_i0 PRJNA666695 33997 340 4.719064 16.0448176 Jujube closterovirus 1 3043313 Viruses Viruses 60.2 1.92e-4   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g32903 i0 94.872 0.197058823529412 39 1 11 1 1 38 6 44 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 67 60.2 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22307814 22307814 PRJNA666695_S_NODE_128338_length_194_cov_1.052288_g127244_i0 PRJNA666695 128338 194 1.052288 2.04143872 Jujube closterovirus 1 3043313 Viruses Viruses 54.7 0.005   NTclustered gi|2496749738|gb|OP673405.1| 3043313 g127244 i0 96.97 0.314432989690722 33 0 17 1 1 33 6 37 Jujube closterovirus 1 isolate AKS15-20, complete genome blastn 61 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Closteroviridae   Jujube closterovirus 1
22310592 22310592 PRJNA666695_S_NODE_80318_length_242_cov_3.547264_g79224_i0 PRJNA666695 80318 242 3.547264 8.58437888 Carlavirus latensdianthi 3427766 Viruses Viruses 54.7 0.006   NTclustered gi|1995060321|gb|MN450069.1| 12164 g79224 i0 100 0.582644628099174 29 0 12 0 214 242 41 13 Carnation latent virus isolate KL, complete genome blastn 141 54.7 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Betaflexiviridae Carlavirus Carlavirus latensdianthi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;