RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA666695" and tax_phylum = "Candidatus Thorarchaeota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Thorarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA666695 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27871151 27871151 PRJNA666695_S_NODE_5685_length_686_cov_9.725581_g4832_i0 PRJNA666695 5685 686 9.725581 66.71748566 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 243 9.89e-75   NR TFF87028.1 2053491 g4832 i0 53.7 1.88483965014577 218 100 94.9 1 685 35 223 440 TFF87028.1 MAG: saccharopine dehydrogenase [Candidatus Thorarchaeota archaeon] diamond 1293 243 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
31535455 31535455 PRJNA666695_S_NODE_174996_length_161_cov_5.750000_g173902_i0 PRJNA666695 174996 161 5.75 9.2575 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 64.3 2.96e-10   NR RLI51003.1 2053491 g173902 i0 59.6 1.75155279503106 52 21 96.9 0 5 160 534 585 RLI51003.1 MAG: hypothetical protein DRO73_01415 [Candidatus Thorarchaeota archaeon] diamond 282 64.3 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon
32421145 32421145 PRJNA666695_S_NODE_157299_length_173_cov_0.840909_g156205_i0 PRJNA666695 157299 173 0.840909 1.45477257 Candidatus Thorarchaeota archaeon 2053491 Archaea Archaea 77.8 6.19e-15   NR MEE9353941.1 2053491 g156205 i0 63.3 0.84971098265896 49 18 85 0 173 27 215 263 MEE9353941.1 integrase [Candidatus Thorarchaeota archaeon] diamond 147 77.8 1 Archaea   Promethearchaeati Candidatus Thorarchaeota         Candidatus Thorarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;