RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA666695" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 4 ✖

tax_clade 1

bioproject 1

  • PRJNA666695 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27018214 27018214 PRJNA666695_S_NODE_157002_length_173_cov_1.348485_g155908_i0 PRJNA666695 157002 173 1.348485 2.33287905 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 43.9 0.00577   NR HEY2484920.1 2785449 g155908 i0 45.9 2.09826589595376 37 20 64.2 0 160 50 369 405 HEY2484920.1 AAA family ATPase [Candidatus Binataceae bacterium] diamond 363 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
28029243 28029243 PRJNA666695_S_NODE_75485_length_249_cov_1.850962_g74391_i0 PRJNA666695 75485 249 1.850962 4.60889538 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 72.8 4.1e-14   NR HSE84729.1 2838779 g74391 i0 45.1 2.85542168674699 82 44 98.8 1 4 249 38 118 HSE84729.1 SOS response-associated peptidase [Candidatus Binatia bacterium] diamond 711 72.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31630208 31630208 PRJNA666695_S_NODE_70056_length_256_cov_5.297674_g68962_i0 PRJNA666695 70056 256 5.297674 13.56204544 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 42.7 0.0317   NR HJY80181.1 2838779 g68962 i0 31.1 0.71484375 61 42 71.5 0 240 58 114 174 HJY80181.1 nucleotide exchange factor GrpE [Candidatus Binatia bacterium] diamond 183 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32358103 32358103 PRJNA666695_S_NODE_32299_length_347_cov_2.039216_g31205_i0 PRJNA666695 32299 347 2.039216 7.07607952 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 44.3 0.0102   NR HEY7555287.1 2838779 g31205 i0 31.7 0.708933717579251 82 45 70.9 2 306 61 29 99 HEY7555287.1 ASCH domain-containing protein [Candidatus Binatia bacterium] diamond 246 44.3 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;