RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA666695" and tax_kingdom = "Pararnavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Pararnavirae · 2 ✖

bioproject 1

  • PRJNA666695 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29733783 29733783 PRJNA666695_S_NODE_14850_length_465_cov_5.858491_g13760_i0 PRJNA666695 14850 465 5.858491 27.24198315 Moloney murine leukemia virus 11801 Viruses Viruses 300 6.04e-91   NR NP_057933.2 11801 g13760 i0 97.4 4 155 4 100 0 465 1 1138 1292 NP_057933.2 Pr180 [Moloney murine leukemia virus] diamond 1860 300 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu
31598752 31598752 PRJNA666695_S_NODE_5236_length_710_cov_9.786248_g4421_i0 PRJNA666695 5236 710 9.786248 69.4823608 Gammaretrovirus murleu 3428959 Viruses Viruses 483 2.17e-168   NR 8WUS_E 11801 g4421 i0 99.2 2.99154929577465 236 2 99.7 0 708 1 119 354 8WUS_E Chain E, Gag-Pol polyprotein [Moloney murine leukemia virus] diamond 2124 483 1 Viruses   Pararnavirae Artverviricota Revtraviricetes Ortervirales Retroviridae Gammaretrovirus Gammaretrovirus murleu

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;