RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA666695", tax_kingdom = "Orthornavirae" and tax_phylum = "Duplornaviricota"

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tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 1 ✖

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA666695 · 1 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21033354 21033354 PRJNA666695_S_NODE_144477_length_181_cov_2.957143_g143383_i0 PRJNA666695 144477 181 2.957143 5.35242883 Orbivirus umatillaense 3431255 Viruses Viruses 52.8 0.015   NTclustered gi|2155919868|emb|OV055174.1| 40060 g143383 i0 96.875 0.176795580110497 32 0 18 1 28 59 483 453 Umatilla virus isolate ED-I-93-19 genome assembly, segment: 6 blastn 32 52.8 1 Viruses   Orthornavirae Duplornaviricota Resentoviricetes Reovirales Sedoreoviridae Orbivirus Orbivirus umatillaense

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;