RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA666695", tax_kingdom = "Fungi" and tax_phylum = "Olpidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Olpidiomycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA666695 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27061989 27061989 PRJNA666695_S_NODE_74002_length_251_cov_1.752381_g72908_i0 PRJNA666695 74002 251 1.752381 4.39847631 Fungi 4751 Fungi Fungi 67 3.83e-12   NR KAG5459699.1 278681 g72908 i0 69.8 4.11155378486056 43 13 51.4 0 3 131 64 106 KAG5459699.1 MAG: hypothetical protein BJ554DRAFT_8349 [Olpidium bornovanus] diamond 1032 67 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus
28356787 28356787 PRJNA666695_S_NODE_158966_length_171_cov_3.315385_g157872_i0 PRJNA666695 158966 171 3.315385 5.66930835 Fungi 4751 Fungi Fungi 43.9 0.00514   NR KAG5455668.1 278681 g157872 i0 35.4 2.52631578947368 48 27 84.2 1 1 144 153 196 KAG5455668.1 MAG: histidine phosphatase superfamily, partial [Olpidium bornovanus] diamond 432 43.9 1 Eukaryota Opisthokonta Fungi Olpidiomycota Olpidiomycetes Olpidiales Olpidiaceae Olpidium Olpidium bornovanus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;