RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA666695", tax_clade = "FCB group" and tax_phylum = "Rhodothermota"

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tax_superkingdom 1

tax_phylum 1

  • Rhodothermota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA666695 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9559163 9559163 PRJNA666695_S_NODE_135368_length_188_cov_2.176871_g134274_i0 PRJNA666695 135368 188 2.176871 4.09251748 Rhodothermales bacterium 2306054 Bacteria Bacteria 89.7 4.98e-19   NR HMB90845.1 2306054 g134274 i0 66.1 4.9468085106383 62 21 98.9 0 187 2 583 644 HMB90845.1 acetate--CoA ligase [Rhodothermales bacterium] diamond 930 89.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales     Rhodothermales bacterium
27871126 27871126 PRJNA666695_S_NODE_36365_length_331_cov_19.903448_g35271_i0 PRJNA666695 36365 331 19.903448 65.88041288 Rubricoccaceae bacterium 2838334 Bacteria Bacteria 75.1 7.06e-14   NR MDX1439606.1 2838334 g35271 i0 50 3.77039274924471 82 40 74.3 1 2 247 130 210 MDX1439606.1 aquaporin [Rubricoccaceae bacterium] diamond 1248 75.1 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Rubricoccaceae   Rubricoccaceae bacterium
29512935 29512935 PRJNA666695_S_NODE_64390_length_265_cov_4.745536_g63296_i0 PRJNA666695 64390 265 4.745536 12.5756704 Rhodothermia bacterium 2497633 Bacteria Bacteria 59.3 5.07e-8   NR MFV1981061.1 2497633 g63296 i0 56.3 1.12075471698113 48 19 54.3 1 263 120 233 278 MFV1981061.1 dienelactone hydrolase family protein [Rhodothermia bacterium] diamond 297 59.3 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia       Rhodothermia bacterium
31630204 31630204 PRJNA666695_S_NODE_66216_length_262_cov_5.981900_g65122_i0 PRJNA666695 66216 262 5.9819 15.672578 Salinivenus sp. 1885341 Bacteria Bacteria 49.7 1.59e-4   NR MEF8938502.1 1885341 g65122 i0 56.5 1.05343511450382 46 15 52.7 2 247 110 283 323 MEF8938502.1 NAD(P)H-quinone oxidoreductase [Salinivenus sp.] diamond 276 49.7 1 Bacteria FCB group Pseudomonadati Rhodothermota Rhodothermia Rhodothermales Salinibacteraceae Salinivenus Salinivenus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;