contig_metadata
4 rows where bioproject = "PRJNA666695", tax_clade = "FCB group" and tax_phylum = "Chlorobiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 27283315 | 27283315 | PRJNA666695_S_NODE_126023_length_195_cov_3.883117_g124929_i0 | PRJNA666695 | 126023 | 195 | 3.883117 | 7.57207815 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 50.1 | 4.3e-5 | NR | RFM24283.1 | 1868324 | g124929 | i0 | 47 | 2 | 66 | 25 | 98.5 | 2 | 194 | 3 | 183 | 240 | RFM24283.1 MAG: DUF4396 domain-containing protein [Candidatus Thermochlorobacter aerophilum] | diamond | 390 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Candidatus Thermochlorobacteriaceae | Candidatus Thermochlorobacter | Candidatus Thermochlorobacter aerophilus | |
| 28167566 | 28167566 | PRJNA666695_S_NODE_135525_length_188_cov_1.877551_g134431_i0 | PRJNA666695 | 135525 | 188 | 1.877551 | 3.52979588 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 65.1 | 2.85e-11 | NR | WP_226986797.1 | 1097 | g134431 | i0 | 50 | 11.3617021276596 | 66 | 29 | 98.9 | 1 | 1 | 186 | 66 | 131 | WP_226986797.1 glycoside hydrolase family 19 protein [Chlorobaculum tepidum] | diamond | 2136 | 65.5 | 0.993893129770992 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Chlorobaculum | Chlorobaculum tepidum | |
| 28408067 | 28408067 | PRJNA666695_S_NODE_93006_length_227_cov_2.720430_g91912_i0 | PRJNA666695 | 93006 | 227 | 2.72043 | 6.1753761 | Chlorobiota bacterium | 2268192 | Bacteria | Bacteria | 55.8 | 3.8e-7 | NR | NPA34163.1 | 2268192 | g91912 | i0 | 38.5 | 0.859030837004405 | 65 | 38 | 85.9 | 1 | 14 | 208 | 59 | 121 | NPA34163.1 hypothetical protein [Chlorobiota bacterium] | diamond | 195 | 55.8 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiota bacterium | |||||
| 30555230 | 30555230 | PRJNA666695_S_NODE_124433_length_197_cov_1.474359_g123339_i0 | PRJNA666695 | 124433 | 197 | 1.474359 | 2.90448723 | Prosthecochloris sp. GSB1 | 281093 | Bacteria | Bacteria | 63.5 | 6.72e-10 | NR | WP_094083712.1 | 281093 | g123339 | i0 | 57.1 | 1.4010152284264 | 49 | 21 | 74.6 | 0 | 159 | 13 | 3 | 51 | WP_094083712.1 SDR family NAD(P)-dependent oxidoreductase [Prosthecochloris sp. GSB1] | diamond | 276 | 63.5 | 1 | Bacteria | FCB group | Pseudomonadati | Chlorobiota | Chlorobiia | Chlorobiales | Chlorobiaceae | Prosthecochloris | Prosthecochloris sp. GSB1 |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;