RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA666695", tax_clade = "Candidatus Pacearchaeota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_kingdom 1

tax_clade 1

  • Candidatus Pacearchaeota · 2 ✖

bioproject 1

  • PRJNA666695 · 2 ✖

analysis 1

tax_phylum 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28123862 28123862 PRJNA666695_S_NODE_65005_length_264_cov_5.529148_g63911_i0 PRJNA666695 65005 264 5.529148 14.59695072 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 63.5 2.84e-10   NR MBS3086043.1 2026773 g63911 i0 54.9 0.579545454545455 51 23 58 0 263 111 102 152 MBS3086043.1 YbaK/EbsC family protein [Candidatus Pacearchaeota archaeon] diamond 153 63.5 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
28388432 28388432 PRJNA666695_S_NODE_88366_length_232_cov_3.371728_g87272_i0 PRJNA666695 88366 232 3.371728 7.82240896 Archaea 2157 Archaea Archaea 48.9 2.01e-4   NR MBS3081281.1 2026773 g87272 i0 31.9 2.61206896551724 69 47 89.2 0 221 15 254 322 MBS3081281.1 FAD-dependent oxidoreductase [Candidatus Pacearchaeota archaeon] diamond 606 48.9 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;