RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA666695", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA666695 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23584773 23584773 PRJNA666695_S_NODE_28899_length_361_cov_6.068750_g27806_i0 PRJNA666695 28899 361 6.06875 21.9081875 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 150 1.99e-39   NR MBB16726.1 2026781 g27806 i0 68.6 19.4875346260388 102 32 84.8 0 1 306 594 695 MBB16726.1 NAD(+) synthase [Candidatus Poribacteria bacterium] diamond 7035 150 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
27378365 27378365 PRJNA666695_S_NODE_63163_length_267_cov_8.703540_g62069_i0 PRJNA666695 63163 267 8.70354 23.2384518 Bacillati 1783272 Bacteria Bacteria 77.8 8e-15   NR MDE0022546.1 2026781 g62069 i0 41.5 4.24719101123596 94 49 98.9 3 266 3 188 281 MDE0022546.1 DUF547 domain-containing protein [Candidatus Poribacteria bacterium] diamond 1134 77.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
30334784 30334784 PRJNA666695_S_NODE_99812_length_220_cov_1.664804_g98718_i0 PRJNA666695 99812 220 1.664804 3.6625688 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 47.8 4.88e-4   NR MCG9127611.1 2026781 g98718 i0 38.3 0.818181818181818 60 35 79.1 1 211 38 557 616 MCG9127611.1 cadherin domain-containing protein [Candidatus Poribacteria bacterium] diamond 180 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium
31041801 31041801 PRJNA666695_S_NODE_100175_length_219_cov_3.617978_g99081_i0 PRJNA666695 100175 219 3.617978 7.92337182 Bacteria 2 Bacteria Bacteria 52.8 8.2e-6   NR MBM3235255.1 2026781 g99081 i0 66.7 3.35616438356164 33 11 45.2 0 10 108 387 419 MBM3235255.1 WD40 repeat domain-containing protein [Candidatus Poribacteria bacterium] diamond 735 53.1 0.994350282485876 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;