RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

33 rows where bioproject = "PRJNA666695", tax_clade = "Apusozoa" and tax_superkingdom = "Eukaryota"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

  • Eukaryota · 33 ✖

tax_clade 1

  • Apusozoa · 33 ✖

bioproject 1

  • PRJNA666695 · 33 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7008801 7008801 PRJNA666695_S_NODE_114206_length_206_cov_1.545455_g113112_i0 PRJNA666695 114206 206 1.545455 3.1836373 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 108 1.94e-25   NR XP_013760135.1 461836 g113112 i0 69.1 2.95631067961165 68 21 99 0 205 2 272 339 XP_013760135.1 ABC transporter A family member 10 [Thecamonas trahens ATCC 50062] diamond 609 109 0.990825688073395 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
9559156 9559156 PRJNA666695_S_NODE_135088_length_188_cov_2.816327_g133994_i0 PRJNA666695 135088 188 2.816327 5.29469476 Thecamonas trahens 529818 Root_unresolved Root_unresolved 54.7 0.004   NTclustered gi|923136139|ref|XM_013906081.1| 461836 g133994 i0 96.875 0.319148936170213 32 1 17 0 81 112 49 18 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_01482), mRNA blastn 60 54.7 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
14662074 14662074 PRJNA666695_S_NODE_73452_length_251_cov_6.190476_g72358_i0 PRJNA666695 73452 251 6.190476 15.53809476 Thecamonas trahens 529818 Root_unresolved Root_unresolved 56.5 0.002   NTclustered gi|923123300|ref|XM_013899665.1| 461836 g72358 i0 100 0.119521912350598 30 0 12 0 222 251 1381 1352 Thecamonas trahens ATCC 50062 uncharacterized protein (AMSG_08704), mRNA blastn 30 56.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
26986469 26986469 PRJNA666695_S_NODE_179122_length_159_cov_1.949153_g178028_i0 PRJNA666695 179122 159 1.949153 3.09915327 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.2 7.26e-10   NR XP_013757400.1 461836 g178028 i0 56.9 0.962264150943396 51 22 96.2 0 3 155 300 350 XP_013757400.1 solute carrier family 12 member 9 [Thecamonas trahens ATCC 50062] diamond 153 63.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27429401 27429401 PRJNA666695_S_NODE_143843_length_182_cov_1.631206_g142749_i0 PRJNA666695 143843 182 1.631206 2.96879492 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 4.8e-6   NR XP_013755427.1 461836 g142749 i0 41.9 4.6978021978022 62 33 98.9 2 181 2 713 773 XP_013755427.1 ribosome assembly protein 4 [Thecamonas trahens ATCC 50062] diamond 855 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27429404 27429404 PRJNA666695_S_NODE_151283_length_176_cov_4.770370_g150189_i0 PRJNA666695 151283 176 4.77037 8.3958512 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 56.2 2.65e-7   NR XP_013757665.1 461836 g150189 i0 43.3 2.14772727272727 60 31 97.2 1 2 172 1492 1551 XP_013757665.1 Sec71 [Thecamonas trahens ATCC 50062] diamond 378 56.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27555299 27555299 PRJNA666695_S_NODE_68064_length_259_cov_6.958716_g66970_i0 PRJNA666695 68064 259 6.958716 18.02307444 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.5 1.59e-6   NR XP_013761416.1 461836 g66970 i0 37.8 0.857142857142857 74 45 85.7 1 28 249 248 320 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 222 55.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27618735 27618735 PRJNA666695_S_NODE_175864_length_161_cov_1.816667_g174770_i0 PRJNA666695 175864 161 1.816667 2.92483387 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.3 5.94e-5   NR XP_013759266.1 461836 g174770 i0 39.2 0.950310559006211 51 31 95 0 3 155 356 406 XP_013759266.1 serine/threonine protein kinase [Thecamonas trahens ATCC 50062] diamond 153 49.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27682098 27682098 PRJNA666695_S_NODE_15684_length_455_cov_54.113527_g14593_i0 PRJNA666695 15684 455 54.113527 246.21654785 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 1.51e-8   NR XP_013760592.1 461836 g14593 i0 68.9 0.296703296703297 45 14 29.7 0 2 136 295 339 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 135 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
27808251 27808251 PRJNA666695_S_NODE_139444_length_185_cov_2.027778_g138350_i0 PRJNA666695 139444 185 2.027778 3.7513893 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87.8 1.09e-18   NR XP_013759258.1 461836 g138350 i0 66.7 1.71891891891892 54 18 87.6 0 3 164 302 355 XP_013759258.1 lactoylglutathione lyase [Thecamonas trahens ATCC 50062] diamond 318 87.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28230341 28230341 PRJNA666695_S_NODE_23906_length_387_cov_11.225434_g22813_i0 PRJNA666695 23906 387 11.225434 43.44242958 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 82.4 2.39e-15   NR XP_013762488.1 461836 g22813 i0 37.5 3.67441860465116 120 67 89.9 4 364 17 550 665 XP_013762488.1 uncharacterized protein AMSG_00759 [Thecamonas trahens ATCC 50062] diamond 1422 82.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28408057 28408057 PRJNA666695_S_NODE_7466_length_614_cov_3.621291_g6519_i0 PRJNA666695 7466 614 3.621291 22.23472674 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 68.2 2.16e-9   NR XP_013757702.1 461836 g6519 i0 49.1 1.19218241042345 53 27 25.9 0 187 29 122 174 XP_013757702.1 transcription factor protein [Thecamonas trahens ATCC 50062] diamond 732 68.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
28609524 28609524 PRJNA666695_S_NODE_68367_length_259_cov_2.743119_g67273_i0 PRJNA666695 68367 259 2.743119 7.10467821 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 83.2 2.65e-16   NR XP_013754695.1 461836 g67273 i0 57.8 2.62934362934363 64 27 74.1 0 2 193 531 594 XP_013754695.1 methylenetetrahydrofolate reductase [Thecamonas trahens ATCC 50062] diamond 681 83.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29102748 29102748 PRJNA666695_S_NODE_50508_length_292_cov_4.095618_g49414_i0 PRJNA666695 50508 292 4.095618 11.95920456 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 120 8.059999999999999e-31   NR XP_013758935.1 461836 g49414 i0 75 0.780821917808219 76 19 78.1 0 1 228 244 319 XP_013758935.1 GDP-L-fucose synthase [Thecamonas trahens ATCC 50062] diamond 228 120 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29102755 29102755 PRJNA666695_S_NODE_59288_length_274_cov_5.287554_g58194_i0 PRJNA666695 59288 274 5.287554 14.48789796 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 47.4 0.00121   NR XP_013759882.1 461836 g58194 i0 61.3 0.339416058394161 31 12 33.9 0 273 181 295 325 XP_013759882.1 BEM46 family protein [Thecamonas trahens ATCC 50062] diamond 93 47.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
29197490 29197490 PRJNA666695_S_NODE_45029_length_306_cov_1.916981_g43935_i0 PRJNA666695 45029 306 1.916981 5.86596186 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 61.6 7.19e-9   NR XP_013762890.1 461836 g43935 i0 45.2 0.715686274509804 73 34 68.6 2 37 246 110 179 XP_013762890.1 ethylene-responsive element-binding protein [Thecamonas trahens ATCC 50062] diamond 219 61.6 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30049737 30049737 PRJNA666695_S_NODE_153331_length_175_cov_2.059701_g152237_i0 PRJNA666695 153331 175 2.059701 3.60447675 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 53.5 2.36e-6   NR XP_013762071.1 461836 g152237 i0 38 0.857142857142857 50 31 85.7 0 165 16 1062 1111 XP_013762071.1 tumor necrosis factor receptor superfamily member 6B [Thecamonas trahens ATCC 50062] diamond 150 53.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30207657 30207657 PRJNA666695_S_NODE_76732_length_247_cov_2.679612_g75638_i0 PRJNA666695 76732 247 2.679612 6.61864164 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 72.8 1.06e-12   NR XP_013755855.1 461836 g75638 i0 44.7 2.98785425101215 76 40 92.3 1 247 20 510 583 XP_013755855.1 myosin VIIA [Thecamonas trahens ATCC 50062] diamond 738 72.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30461168 30461168 PRJNA666695_S_NODE_88653_length_232_cov_2.172775_g87559_i0 PRJNA666695 88653 232 2.172775 5.040838 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 49.3 1.66e-4   NR XP_013761416.1 461836 g87559 i0 35.7 0.724137931034483 56 35 71.1 1 49 213 16 71 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 168 49.3 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
30808239 30808239 PRJNA666695_S_NODE_190334_length_153_cov_1.642857_g189240_i0 PRJNA666695 190334 153 1.642857 2.51357121 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 75.1 6.52e-15   NR XP_013753590.1 461836 g189240 i0 68 0.980392156862745 50 16 98 0 151 2 130 179 XP_013753590.1 actin-family protein 2/3 complex subunit 3 [Thecamonas trahens ATCC 50062] diamond 150 75.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31155442 31155442 PRJNA666695_S_NODE_48795_length_296_cov_4.282353_g47701_i0 PRJNA666695 48795 296 4.282353 12.67576488 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 131 4.37e-33   NR XP_013761416.1 461836 g47701 i0 62.7 1.03378378378378 102 31 99.3 3 296 3 2169 2267 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 306 131 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31250555 31250555 PRJNA666695_S_NODE_41975_length_314_cov_2.974359_g40881_i0 PRJNA666695 41975 314 2.974359 9.33948726 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 52.8 2.7e-5   NR XP_013756142.1 461836 g40881 i0 39 0.735668789808917 77 45 71.7 1 16 240 1612 1688 XP_013756142.1 Ras oncoprotein [Thecamonas trahens ATCC 50062] diamond 231 52.8 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31313839 31313839 PRJNA666695_S_NODE_25075_length_381_cov_2.623529_g23982_i0 PRJNA666695 25075 381 2.623529 9.99564549 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.5 9.81e-9   NR XP_013761416.1 461836 g23982 i0 36.7 1.51968503937008 98 48 66.1 1 69 320 3062 3159 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 579 63.5 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31472237 31472237 PRJNA666695_S_NODE_85296_length_236_cov_2.358974_g84202_i0 PRJNA666695 85296 236 2.358974 5.56717864 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 58.9 6.92e-8   NR XP_013761416.1 461836 g84202 i0 41.8 1.75423728813559 67 37 82.6 1 223 29 3167 3233 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 414 58.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
31567136 31567136 PRJNA666695_S_NODE_29236_length_360_cov_2.413793_g28143_i0 PRJNA666695 29236 360 2.413793 8.6896548 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 55.1 6.43e-6   NR XP_013760878.1 461836 g28143 i0 45.7 1.2 70 38 58.3 0 112 321 128 197 XP_013760878.1 uncharacterized protein AMSG_02333 [Thecamonas trahens ATCC 50062] diamond 432 55.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32009792 32009792 PRJNA666695_S_NODE_153718_length_175_cov_1.597015_g152624_i0 PRJNA666695 153718 175 1.597015 2.79477625 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 87.4 2.75e-18   NR XP_013761416.1 461836 g152624 i0 66.7 0.977142857142857 57 19 97.7 0 171 1 1720 1776 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 171 87.4 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32041460 32041460 PRJNA666695_S_NODE_30458_length_354_cov_8.472843_g29364_i0 PRJNA666695 30458 354 8.472843 29.99386422 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 171 7.77e-48   NR XP_013757207.1 461836 g29364 i0 71.8 7.94067796610169 117 33 99.2 0 353 3 414 530 XP_013757207.1 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Thecamonas trahens ATCC 50062] diamond 2811 171 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32168168 32168168 PRJNA666695_S_NODE_149778_length_178_cov_1.007299_g148684_i0 PRJNA666695 149778 178 1.007299 1.79299222 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 84 2.31e-17   NR XP_013760592.1 461836 g148684 i0 66.1 7.92134831460674 59 18 99.4 1 1 177 209 265 XP_013760592.1 adenine nucleotide translocator [Thecamonas trahens ATCC 50062] diamond 1410 84 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32243701 32243701 PRJNA666695_S_NODE_144678_length_181_cov_2.471429_g143584_i0 PRJNA666695 144678 181 2.471429 4.47328649 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 63.2 1.02e-9   NR XP_013756022.1 461836 g143584 i0 55.1 1.75690607734807 49 22 81.2 0 2 148 431 479 XP_013756022.1 uncharacterized protein AMSG_07540 [Thecamonas trahens ATCC 50062] diamond 318 63.2 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32294928 32294928 PRJNA666695_S_NODE_66499_length_262_cov_2.452489_g65405_i0 PRJNA666695 66499 262 2.452489 6.42552118 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 80.9 1.72e-15   NR XP_013758709.1 461836 g65405 i0 46.1 1.01908396946565 89 39 97.3 2 260 6 473 556 XP_013758709.1 CMGC/CLK protein kinase [Thecamonas trahens ATCC 50062] diamond 267 80.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32294931 32294931 PRJNA666695_S_NODE_68339_length_259_cov_2.857798_g67245_i0 PRJNA666695 68339 259 2.857798 7.40169682 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 90.1 1.03e-18   NR XP_013761416.1 461836 g67245 i0 55.9 0.787644787644788 68 27 78.8 1 55 258 2335 2399 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 204 90.1 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32641913 32641913 PRJNA666695_S_NODE_179080_length_159_cov_1.949153_g177986_i0 PRJNA666695 179080 159 1.949153 3.09915327 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 63.9 4.08e-10   NR XP_013761416.1 461836 g177986 i0 60.8 0.962264150943396 51 20 96.2 0 1 153 2899 2949 XP_013761416.1 uncharacterized protein AMSG_01915 [Thecamonas trahens ATCC 50062] diamond 153 63.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens
32893960 32893960 PRJNA666695_S_NODE_24960_length_381_cov_8.752941_g23867_i0 PRJNA666695 24960 381 8.752941 33.34870521 Thecamonas trahens ATCC 5 529818 Root_unresolved Root_unresolved 48.9 3.44e-4   NR XP_013758370.1 461836 g23867 i0 48.9 0.37007874015748 47 24 37 0 380 240 95 141 XP_013758370.1 uncharacterized protein AMSG_04698 [Thecamonas trahens ATCC 50062] diamond 141 48.9 1 Eukaryota Apusozoa       Apusomonadida Apusomonadidae Thecamonas Thecamonas trahens

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;