RNAquarium Metadata Server
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contig_metadata

9 rows where bioproject = "PRJNA665531", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 9 ✖

tax_phylum 1

  • Acidobacteriota · 9 ✖

tax_kingdom 1

bioproject 1

  • PRJNA665531 · 9 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7007960 7007960 PRJNA665531_P_NODE_17226_length_250_cov_0.870056_g16990_i0 PRJNA665531 17226 250 0.870056 2.17514 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 150 2.13e-43   NR MBX9601985.1 2212468 g16990 i0 96.4 0.996 83 3 99.6 0 250 2 116 198 MBX9601985.1 glucose 1-dehydrogenase [Bryobacteraceae bacterium] diamond 249 150 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
15932210 15932210 PRJNA665531_P_NODE_18213_length_246_cov_0.890173_g17977_i0 PRJNA665531 18213 246 0.890173 2.18982558 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 143 1.28e-29   NTclustered gi|2874254091|emb|OY970174.1| 171953 g17977 i0 82.716 0.658536585365854 162 26 65 2 47 207 4652262 4652102 MAG: uncultured Acidobacteriota bacterium isolate MFD01275.bin.c.18 genome assembly, chromosome: 1 blastn 162 143 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
17207419 17207419 PRJNA665531_P_NODE_19454_length_239_cov_8.548193_g19218_i0 PRJNA665531 19454 239 8.548193 20.43018127 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 326 1.15e-84   NTclustered gi|2874253692|emb|OY969418.1| 171953 g19218 i0 93.607 133.251046025105 219 13 91 1 21 238 4233972 4233754 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 31847 326 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
18481771 18481771 PRJNA665531_P_NODE_19215_length_241_cov_2.154762_g18979_i0 PRJNA665531 19215 241 2.154762 5.19297642 uncultured Acidobacteriota bacterium 171953 Bacteria Bacteria 52.8 0.022   NTclustered gi|2874253692|emb|OY969418.1| 171953 g18979 i0 100 0.116182572614108 28 0 12 0 65 92 7389713 7389740 MAG: uncultured Acidobacteriota bacterium isolate MFD09212.bin.c.1 genome assembly, chromosome: 1 blastn 28 52.8 1 Bacteria   Pseudomonadati Acidobacteriota         uncultured Acidobacteriota bacterium
29765435 29765435 PRJNA665531_P_NODE_6291_length_429_cov_3.991573_g6055_i0 PRJNA665531 6291 429 3.991573 17.12384817 Acidobacteriota bacterium 1978231 Bacteria Bacteria 59.7 1.48e-8   NR MBI2188566.1 1978231 g6055 i0 45.8 1.16783216783217 83 44 58 1 79 327 6 87 MBI2188566.1 antibiotic biosynthesis monooxygenase [Acidobacteriota bacterium] diamond 501 59.7 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29923619 29923619 PRJNA665531_P_NODE_18871_length_243_cov_0.905882_g18635_i0 PRJNA665531 18871 243 0.905882 2.20129326 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 89 1.55e-18   NR HTA70618.1 2212468 g18635 i0 73.2 4.14814814814815 56 15 69.1 0 75 242 1 56 HTA70618.1 hypothetical protein [Bryobacteraceae bacterium] diamond 1008 89 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium
30713355 30713355 PRJNA665531_P_NODE_17314_length_250_cov_0.870056_g17078_i0 PRJNA665531 17314 250 0.870056 2.17514 Bryobacterales bacterium 2026791 Bacteria Bacteria 165 4.03e-45   NR MBL8240759.1 2026791 g17078 i0 95.1 0.984 82 4 98.4 0 3 248 521 602 MBL8240759.1 TonB-dependent receptor [Bryobacterales bacterium] diamond 246 165 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales     Bryobacterales bacterium
31926897 31926897 PRJNA665531_P_NODE_19357_length_241_cov_0.916667_g19121_i0 PRJNA665531 19357 241 0.916667 2.20916747 Bacteria 2 Bacteria Bacteria 110 7.010000000000001e-26   NR MDE3069534.1 1978231 g19121 i0 80.6 4.48132780082988 72 14 89.6 0 3 218 786 857 MDE3069534.1 AAA family ATPase [Acidobacteriota bacterium] diamond 1080 111 0.990990990990991 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
32358031 32358031 PRJNA665531_P_NODE_18199_length_246_cov_0.890173_g17963_i0 PRJNA665531 18199 246 0.890173 2.18982558 Bryobacteraceae bacterium 2212468 Bacteria Bacteria 107 3.95e-25   NR HZT39126.1 2212468 g17963 i0 61.7 0.98780487804878 81 31 98.8 0 244 2 271 351 HZT39126.1 hypothetical protein [Bryobacteraceae bacterium] diamond 243 107 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Bryobacterales Bryobacteraceae   Bryobacteraceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;