contig_metadata
12 rows where bioproject = "PRJNA665531" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1905285 | 1905285 | PRJNA665531_P_NODE_10862_length_316_cov_1.473251_g10626_i0 | PRJNA665531 | 10862 | 316 | 1.473251 | 4.65547316 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 562 | 1.11e-155 | NTclustered | gi|2063814025|emb|LR586051.1| | 2052164 | g10626 | i0 | 98.734 | 115.398734177215 | 316 | 4 | 100 | 0 | 1 | 316 | 319083 | 318768 | Gemmata bacterium CJuql4 whole genome assembly and annotation | blastn | 36466 | 562 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 1905423 | 1905423 | PRJNA665531_P_NODE_17762_length_248_cov_0.880000_g17526_i0 | PRJNA665531 | 17762 | 248 | 0.88 | 2.1824 | Pirellulales bacterium | 2715253 | Bacteria | Bacteria | 156 | 3.51e-45 | NR | HTU25858.1 | 2715253 | g17526 | i0 | 89 | 1.98387096774194 | 82 | 9 | 99.2 | 0 | 2 | 247 | 25 | 106 | HTU25858.1 50S ribosomal protein L2 [Pirellulales bacterium] | diamond | 492 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Pirellulales | Pirellulales bacterium | |||
| 7007970 | 7007970 | PRJNA665531_P_NODE_17506_length_249_cov_0.875000_g17270_i0 | PRJNA665531 | 17506 | 249 | 0.875 | 2.17875 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 155 | 6.82e-42 | NR | MBX3357020.1 | 2026777 | g17270 | i0 | 92.8 | 2 | 83 | 6 | 100 | 0 | 1 | 249 | 338 | 420 | MBX3357020.1 ATP-dependent zinc metalloprotease FtsH [Phycisphaeraceae bacterium] | diamond | 498 | 155 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 13383634 | 13383634 | PRJNA665531_P_NODE_9231_length_345_cov_1.132353_g8995_i0 | PRJNA665531 | 9231 | 345 | 1.132353 | 3.90661785 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 385 | 2.83e-102 | NTclustered | gi|2621704341|emb|OY760937.1| | 2499141 | g8995 | i0 | 89.068 | 71.1536231884058 | 311 | 32 | 90 | 1 | 37 | 345 | 3990870 | 3990560 | MAG: Verrucomicrobiae bacterium isolate 066a7682-a1ac-48de-8761-1470dc9e5c3e genome assembly, chromosome: 1 | blastn | 24548 | 385 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 19756099 | 19756099 | PRJNA665531_P_NODE_10736_length_318_cov_1.065306_g10500_i0 | PRJNA665531 | 10736 | 318 | 1.065306 | 3.38767308 | Opitutus sp. GAS368 | 1882749 | Bacteria | Bacteria | 492 | 1.48e-134 | NTclustered | gi|1085764882|emb|LT629735.1| | 1882749 | g10500 | i0 | 94.671 | 116.64465408805 | 319 | 14 | 100 | 3 | 1 | 318 | 2834193 | 2834509 | Opitutus sp. GAS368 genome assembly, chromosome: I | blastn | 37093 | 492 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Opitutus | Opitutus sp. GAS368 | |
| 19756463 | 19756463 | PRJNA665531_P_NODE_676_length_1343_cov_5.033858_g590_i0 | PRJNA665531 | 676 | 1343 | 5.033858 | 67.60471294 | Phycisphaeraceae bacterium | 2026777 | Bacteria | Bacteria | 1267 | 0 | NTclustered | gi|2076441902|gb|CP075368.1| | 2026777 | g590 | i0 | 85.62 | 478.580789277736 | 1217 | 164 | 90 | 11 | 126 | 1337 | 2583090 | 2584300 | MAG: Phycisphaeraceae bacterium isolate ACE_PLA2 chromosome | blastn | 642734 | 1267 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaeraceae | Phycisphaeraceae bacterium | ||
| 21031805 | 21031805 | PRJNA665531_P_NODE_14597_length_271_cov_1.555556_g14361_i0 | PRJNA665531 | 14597 | 271 | 1.555556 | 4.21555676 | Roseimicrobium sp. ORNL1 | 2711231 | Bacteria | Bacteria | 95.3 | 4.07e-15 | NTclustered | gi|1815841271|gb|CP049143.1| | 2711231 | g14361 | i0 | 74.088 | 3.65682656826568 | 274 | 52 | 98 | 18 | 1 | 265 | 5627246 | 5626983 | Roseimicrobium sp. ORNL1 chromosome, complete genome | blastn | 991 | 95.3 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Roseimicrobium | Roseimicrobium sp. ORNL1 | |
| 27049971 | 27049971 | PRJNA665531_P_NODE_13562_length_281_cov_1.927885_g13326_i0 | PRJNA665531 | 13562 | 281 | 1.927885 | 5.41735685 | Candidatus Protochlamydia naegleriophila | 389348 | Bacteria | Bacteria | 105 | 3.85e-24 | NR | WP_059062089.1 | 389348 | g13326 | i0 | 55.2 | 0.928825622775801 | 87 | 39 | 92.9 | 0 | 278 | 18 | 586 | 672 | WP_059062089.1 penicillin-binding transpeptidase domain-containing protein [Candidatus Protochlamydia naegleriophila] | diamond | 261 | 105 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Parachlamydiales | Parachlamydiaceae | Candidatus Protochlamydia | Candidatus Protochlamydia naegleriophila | |
| 29512848 | 29512848 | PRJNA665531_P_NODE_17070_length_251_cov_0.865169_g16834_i0 | PRJNA665531 | 17070 | 251 | 0.865169 | 2.17157419 | Phycisphaerales bacterium | 2052180 | Bacteria | Bacteria | 94.7 | 2.13e-20 | NR | HMN39257.1 | 2052180 | g16834 | i0 | 62.4 | 1.01593625498008 | 85 | 29 | 99.2 | 2 | 251 | 3 | 1145 | 1228 | HMN39257.1 ATP-dependent RNA helicase HrpA [Phycisphaerales bacterium] | diamond | 255 | 94.7 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Phycisphaerae | Phycisphaerales | Phycisphaerales bacterium | |||
| 29544425 | 29544425 | PRJNA665531_P_NODE_18190_length_246_cov_0.890173_g17954_i0 | PRJNA665531 | 18190 | 246 | 0.890173 | 2.18982558 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 140 | 1.4299999999999998e-37 | NR | MEK6643633.1 | 2026780 | g17954 | i0 | 81.5 | 1.96341463414634 | 81 | 15 | 98.8 | 0 | 3 | 245 | 275 | 355 | MEK6643633.1 site-specific integrase [Planctomycetota bacterium] | diamond | 483 | 140 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 32579375 | 32579375 | PRJNA665531_P_NODE_17499_length_249_cov_0.875000_g17263_i0 | PRJNA665531 | 17499 | 249 | 0.875 | 2.17875 | Gemmata sp. | 1914242 | Bacteria | Bacteria | 83.2 | 2.25e-16 | NR | HEV3436776.1 | 1914242 | g17263 | i0 | 57.8 | 1 | 83 | 31 | 97.6 | 2 | 248 | 6 | 365 | 445 | HEV3436776.1 HEAT repeat domain-containing protein [Gemmata sp.] | diamond | 249 | 83.2 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata sp. | |
| 32862533 | 32862533 | PRJNA665531_P_NODE_17960_length_247_cov_0.885057_g17724_i0 | PRJNA665531 | 17960 | 247 | 0.885057 | 2.18609079 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 43.5 | 0.00503 | NR | MEM9353643.1 | 2026780 | g17724 | i0 | 45.5 | 0.40080971659919 | 33 | 18 | 40.1 | 0 | 78 | 176 | 48 | 80 | MEM9353643.1 hypothetical protein [Planctomycetota bacterium] | diamond | 99 | 43.5 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;