RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA665531", tax_clade = "Opisthokonta" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA665531 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3180072 3180072 PRJNA665531_P_NODE_10623_length_319_cov_3.288618_g10387_i0 PRJNA665531 10623 319 3.288618 10.49069142 Physella acuta 109671 Mollusca Mollusca 52.8 0.03   NTclustered gi|2572411827|ref|XM_059320587.1| 109671 g10387 i0 96.774 0.0971786833855799 31 1 10 0 112 142 2135 2165 PREDICTED: Physella acuta uncharacterized LOC131956164 (LOC131956164), mRNA blastn 31 52.8 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
10833480 10833480 PRJNA665531_P_NODE_18149_length_246_cov_1.520231_g17913_i0 PRJNA665531 18149 246 1.520231 3.73976826 Physella acuta 109671 Mollusca Mollusca 110 1.3e-19   NTclustered gi|2572438903|ref|XM_059287256.1| 109671 g17913 i0 82.787 4.39837398373984 122 21 50 0 22 143 541 662 PREDICTED: Physella acuta ubiquitin-ribosomal protein eL40 fusion protein (LOC131930670), mRNA blastn 1082 110 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta
13383318 13383318 PRJNA665531_P_NODE_14591_length_271_cov_1.555556_g14355_i0 PRJNA665531 14591 271 1.555556 4.21555676 Haliotis asinina 109174 Mollusca Mollusca 189 1.8199999999999998e-43   NTclustered gi|2793362711|ref|XM_067792523.1| 109174 g14355 i0 82.857 9.71586715867159 210 36 77 0 14 223 349 558 PREDICTED: Haliotis asinina large ribosomal subunit protein uL14 (LOC137254678), mRNA blastn 2633 189 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina
28104128 28104128 PRJNA665531_P_NODE_8925_length_351_cov_5.751799_g8689_i0 PRJNA665531 8925 351 5.751799 20.18881449 Metazoa 33208 Mollusca Mollusca 82.4 2.85e-16   NR XP_059141807.1 109671 g8689 i0 52.5 3.37606837606838 59 28 50.4 0 276 100 191 249 XP_059141807.1 carboxypeptidase inhibitor SmCI-like [Physella acuta] diamond 1185 82.4 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Physidae Physella Physella acuta

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;